RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 EXD3Q8N9H8 876 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 SLC38A9Q8NBW4 561 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 C19orf18Q8NEA5 215 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 LIPHQ8WWY8 451 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 ACOT12Q8WYK0 555 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 HSD17B8Q92506 261 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 ST6GAL2Q96JF0 529 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 KCNJ15Q99712 375 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 FANCFQ9NPI8 374 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 CYSLTR2Q9NS75 346 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 CLEC4AQ9UMR7 237 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 A0A1B0GX78 115 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 SOX1O00570 391 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 GLCEO94923 617 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 S100A6P06703 90 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 FAM157BP0CG42 384 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 RAB3BP20337 219 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 RPS27P42677 84 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 MAP2K3P46734 347 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 GBX2P52951 348 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 ACTA2P62736 377 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 ACTG2P63267 376 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 LGALS3BPQ08380 585 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 ISXQ2M1V0 245 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 MESTQ5EB52 335 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 ATAD3CQ5T2N8 411 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 BTN2A1Q7KYR7 527 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 COX15Q7KZN9 410 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 TPRA1Q86W33 373 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 MS4A15Q8N5U1 240 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 TRMT10AQ8TBZ6 339 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 OMA1Q96E52 524 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 TSPAN32Q96QS1 320 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 UBL7Q96S82 380 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 WACQ9BTA9 647 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 LAT2Q9GZY6 243 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 FSCN3Q9NQT6 498 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 NPAP1Q9NZP6 1156 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 SEMA5BQ9P283 1151 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 NLKQ9UBE8 527 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 EXPH5Q8NEV8 1989 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 LYRM1O43325 122 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 IDH3BO43837 385 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 NUDT14O95848 222 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 PSKH1P11801 424 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 ATF1P18846 271 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 SDHAP31040 664 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 PLCXD2Q0VAA5 305 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 SLC35D3Q5M8T2 416 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 ZNF684Q5T5D7 378 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 HLA-DQA1Q5Y7H0 255 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 LRRC28Q86X40 367 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 OR6V1Q8N148 313 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 BMPERQ8N8U9 685 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 OR1N1Q8NGS0 311 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 ENKURQ8TC29 256 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 ABHD1Q96SE0 405 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 ZNF700Q9H0M5 742 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 RNF121Q9H920 327 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 AK6Q9Y3D8 172 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 ADAMTS9Q9P2N4 1935 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 ARPC4-TTLL3A0A0A6YYG9 625 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 A0A1B0GTH9 108 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 TMEM72A0PK05 275 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 TVP23AA6NH52 213 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 PIN1P1O15428 100 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 SCO2O43819 266 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 ZNF354AO60765 605 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 TIAF1O95411 115 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 SNRPBP14678 240 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 PTBP1P26599 531 aaKnown RBP eCLIP7.22□□□□□ -1.251e-7■■□□□ 13
PDLIM5-204ENST00000380176 CXCL12P48061 93 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 GPLD1P80108 840 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 TBRG1Q3YBR2 411 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 RPL22L1Q6P5R6 122 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 ESPNLQ6ZVH7 1005 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 RGP1Q92546 391 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 DAZLQ92904 295 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 CLDN23Q96B33 292 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 UPRTQ96BW1 309 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 CCNL2Q96S94 520 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 TTYH2Q9BSA4 534 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 BEX2Q9BXY8 128 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 DUSP15Q9H1R2 295 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 NEK6Q9HC98 313 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 RBFOX1Q9NWB1 397 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 NUFIP1Q9UHK0 495 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 ATPIF1Q9UII2 106 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 ADAM30Q9UKF2 790 aa7.22□□□□□ -1.25
PDLIM5-204ENST00000380176 ACOD1A6NK06 481 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 C11orf98E9PRG8 122 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 ADAM10O14672 748 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 FZD7O75084 574 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 RPP14O95059 124 aaKnown RBP7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 IGF2P01344 180 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 UCHL1P09936 223 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 OR8G3PP0DMU2 310 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 EPXP11678 715 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 NPR2P20594 1047 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 AGFG1P52594 562 aaKnown RBP7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms