RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 RNF208Q9H0X6 261 aa14.32□□□□□ -0.12
CSNK1A1-202ENST00000377843 TMEM100Q9NV29 134 aa14.32□□□□□ -0.12
CSNK1A1-202ENST00000377843 ICAM5Q9UMF0 924 aa14.32□□□□□ -0.12
CSNK1A1-202ENST00000377843 NUMA1Q14980 2115 aa14.32□□□□□ -0.12
CSNK1A1-202ENST00000377843 C1orf196B1AJZ1 125 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 LILRB5O75023 590 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 LY86O95711 162 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 CSF1P09603 554 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 AKAIN1P0CW23 69 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 CSRP1P21291 193 aaKnown RBP14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 OR1D2P34982 312 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 F2RL1P55085 397 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 LTBQ06643 244 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 Q3ZCU0 254 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 C9orf64Q5T6V5 341 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 LCTLQ6UWM7 567 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 SLC35F2Q8IXU6 374 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 PAQR4Q8N4S7 273 aaPredicted RBP14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 OR4C6Q8NH72 309 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 LAT2Q9GZY6 243 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 KIAA0100Q14667 2235 aaKnown RBP14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 XRCC3O43542 346 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 ZNF3P17036 446 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 SOX2P48431 317 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 SSTP61278 116 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 ILF3Q12906 894 aaKnown RBP eCLIP14.31□□□□□ -0.122e-6■■■■□ 20.3
CSNK1A1-202ENST00000377843 KCNAB1Q14722 419 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 AKIRIN2Q53H80 203 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 LIN54Q6MZP7 749 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 GDPD4Q6W3E5 623 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 SLC24A5Q71RS6 500 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 DPPA4Q7L190 304 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 TMCO2Q7Z6W1 182 aaPredicted RBP14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 DCUN1D3Q8IWE4 304 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 OR9A2Q8NGT5 310 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 SLC2A12Q8TD20 617 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 BPIFA2Q96DR5 249 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 MAP3K3Q99759 626 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 ZDHHC5Q9C0B5 715 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 ALX4Q9H161 411 aaPredicted RBP14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 KLHL31Q9H511 634 aa14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 MTCL1Q9Y4B5 1905 aaKnown RBP14.31□□□□□ -0.12
CSNK1A1-202ENST00000377843 A0A1W2PR48 441 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 ZNF729A6NN14 1252 aaPredicted RBP14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 RCBTB2O95199 551 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 POP4O95707 220 aaKnown RBP14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 PMS2P2O95744 297 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 GRPRP30550 384 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 HGFACQ04756 655 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 OR4C11Q6IEV9 310 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 TMPRSS12Q86WS5 348 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 TRAPPC5Q8IUR0 188 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 CLEC1AQ8NC01 280 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 SLC16A11Q8NCK7 471 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 NUP43Q8NFH3 380 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 OR10R2Q8NGX6 335 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 SFXN5Q8TD22 340 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 SLITRK2Q9H156 845 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 TMEM27Q9HBJ8 222 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 USP36Q9P275 1121 aaKnown RBP14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 METTL1Q9UBP6 276 aaKnown RBP14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 ZNF281Q9Y2X9 895 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 ATG4BQ9Y4P1 393 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 TCF20Q9UGU0 1960 aaKnown RBP14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 A0A0A6YYC8 382 aaPredicted RBP14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 WASH3PC4AMC7 463 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 I3L1I5 382 aaPredicted RBP14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 EOMESO95936 686 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 OR2T7P0C7T2 308 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 AGAP20933 346 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 SSR2P43308 183 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 ACTA2P62736 377 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 ACTG2P63267 376 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 CXADRP78310 365 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 SRSF4Q08170 494 aaKnown RBP14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 DHRS2Q13268 280 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 ELAVL1Q15717 326 aaKnown RBP14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 ENPP7Q6UWV6 458 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 DEFB128Q7Z7B8 93 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 C17orf64Q86WR6 236 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 OR2T27Q8NH04 317 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 NUBPLQ8TB37 319 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 TMED6Q8WW62 240 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 FGF13Q92913 245 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 RAD51AP1Q96B01 352 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 SGK3Q96BR1 496 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 TNFRSF13CQ96RJ3 184 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 SELENOIQ9C0D9 397 aa14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 PCYT1BQ9Y5K3 369 aaPredicted RBP14.3□□□□□ -0.12
CSNK1A1-202ENST00000377843 TSPAN11A1L157 253 aa14.29□□□□□ -0.12
CSNK1A1-202ENST00000377843 GGT3PA6NGU5 568 aa14.29□□□□□ -0.12
CSNK1A1-202ENST00000377843 C9JQL5 133 aa14.29□□□□□ -0.12
CSNK1A1-202ENST00000377843 H3BSH0 61 aa14.29□□□□□ -0.12
CSNK1A1-202ENST00000377843 M0QYG6 137 aa14.29□□□□□ -0.12
CSNK1A1-202ENST00000377843 WRBO00258 174 aa14.29□□□□□ -0.12
CSNK1A1-202ENST00000377843 IGHV2-5P01817 119 aa14.29□□□□□ -0.12
CSNK1A1-202ENST00000377843 CD74P04233 296 aa14.29□□□□□ -0.12
CSNK1A1-202ENST00000377843 RPN2P04844 631 aa14.29□□□□□ -0.12
CSNK1A1-202ENST00000377843 STEAP1BQ6NZ63 245 aa14.29□□□□□ -0.12
CSNK1A1-202ENST00000377843 DMRTC2Q8IXT2 367 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms