RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 LYRM1O43325 122 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 SDHAP31040 664 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 FAM205BPQ63HN1 556 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 AWAT2Q6E213 333 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 AAED1Q7RTV5 226 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 CLDN22Q8N7P3 220 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 PDCD1LG2Q9BQ51 273 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 KLHL9Q9P2J3 617 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 DISC1C4P0D8 188 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 EIF1BO60739 113 aaKnown RBP13.25□□□□□ -0.29
TCOF1-202ENST00000377797 TMEM225BP0DP42 221 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 SPI1P17947 270 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 CAPZA1P52907 286 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 HCCSP53701 268 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 FTMTQ8N4E7 242 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 ST8SIA1Q92185 356 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 OR14A2Q96R54 314 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 TWSG1Q9GZX9 223 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 PRELID1Q9Y255 219 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 A0A1W2PNR3 127 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 NOTOA8MTQ0 251 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 SMAD9O15198 467 aaKnown RBP13.24□□□□□ -0.29
TCOF1-202ENST00000377797 CD79AP11912 226 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 SLC2A5P22732 501 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 DLSTP36957 453 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 RPS19P39019 145 aaKnown RBP13.24□□□□□ -0.29
TCOF1-202ENST00000377797 GALEQ14376 348 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 P2RY14Q15391 338 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 ABCA11PQ4W5N1 156 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 PWWP2BQ6NUJ5 590 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 MTFR2Q6P444 385 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 TMEM52Q8NDY8 209 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 OR4D9Q8NGE8 314 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 CST11Q9H112 138 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 C20orf141Q9NUB4 165 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 ZNF346Q9UL40 294 aaKnown RBP13.24□□□□□ -0.29
TCOF1-202ENST00000377797 R4GN57 208 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 A0A087WUJ7 227 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 A0A0B4J2E0 115 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 A0A1B0GX12 115 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 MRPL33O75394 65 aaKnown RBP13.24□□□□□ -0.29
TCOF1-202ENST00000377797 WNT1P04628 370 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 YES1P07947 543 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 RRADP55042 308 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 SPOCK1Q08629 439 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 TMEM201Q5SNT2 666 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 NDUFAF7Q7L592 441 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 ARIH2OSQ8N7S6 290 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 ADAMTS14Q8WXS8 1223 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 FAIMQ9NVQ4 179 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 VSX1Q9NZR4 365 aaPredicted RBP13.24□□□□□ -0.29
TCOF1-202ENST00000377797 CES1P1Q9UKY3 287 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 COA3Q9Y2R0 106 aaPredicted RBP13.24□□□□□ -0.29
TCOF1-202ENST00000377797 NOP16Q9Y3C1 178 aaKnown RBP13.24□□□□□ -0.29
TCOF1-202ENST00000377797 WIF1Q9Y5W5 379 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 PATE3B3GLJ2 98 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 RBMXL2O75526 392 aaKnown RBP13.24□□□□□ -0.29
TCOF1-202ENST00000377797 GPX5O75715 221 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 LCN1P31025 176 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 C9orf135Q5VTT2 229 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 RHBDD2Q6NTF9 364 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 DCDC5Q6ZRR9 648 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 LRRC28Q86X40 367 aaPredicted RBP13.24□□□□□ -0.29
TCOF1-202ENST00000377797 MRI1Q9BV20 369 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 ENKD1Q9H0I2 346 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 ZNF701Q9NV72 531 aaPredicted RBP13.24□□□□□ -0.29
TCOF1-202ENST00000377797 CHD5Q8TDI0 1954 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 PRSS3P35030 304 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 DIO1P49895 249 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 CARD18P57730 90 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 IL11RAQ14626 422 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 C12orf73Q69YU5 71 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 VASH1Q7L8A9 365 aaPredicted RBP13.24□□□□□ -0.29
TCOF1-202ENST00000377797 SLC16A9Q7RTY1 509 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 LRRC18Q8N456 261 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 OR4D11Q8NGI4 311 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 LHX9Q9NQ69 397 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 ABRACLQ9P1F3 81 aa13.24□□□□□ -0.29
TCOF1-202ENST00000377797 TMEM212A6NML5 194 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 TGFBR1P36897 503 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 PSG6Q00889 435 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 LIPNQ5VXI9 398 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 ZNF454Q8N9F8 522 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 OR5D14Q8NGL3 314 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 SMAP2Q8WU79 429 aaPredicted RBP13.23□□□□□ -0.29
TCOF1-202ENST00000377797 TTC9Q92623 222 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 SCGB3A2Q96PL1 93 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 GGT3PA6NGU5 568 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 BOLA2-SMG1P6H3BVE0 249 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 FFAR1O14842 300 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 DNAJB6O75190 326 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 MPIG6BO95866 241 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 CD3GP09693 182 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 SNRPBP14678 240 aaKnown RBP13.23□□□□□ -0.29
TCOF1-202ENST00000377797 TBXA2RP21731 343 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 CLDN12P56749 244 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 C16orf47Q6ZP98 133 aaPredicted RBP13.23□□□□□ -0.29
TCOF1-202ENST00000377797 TMPRSS11FQ6ZWK6 438 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 OVCH1Q7RTY7 1134 aa13.23□□□□□ -0.29
TCOF1-202ENST00000377797 OR4Q3Q8NH05 313 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms