RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 KDM8Q8N371 416 aa16.62■□□□□ 0.25
RXRB-202ENST00000374685 ATOH1Q92858 354 aaPredicted RBP16.62■□□□□ 0.25
RXRB-202ENST00000374685 MVB12AQ96EY5 273 aa16.62■□□□□ 0.25
RXRB-202ENST00000374685 PELI1Q96FA3 418 aa16.62■□□□□ 0.25
RXRB-202ENST00000374685 OR11A1Q9GZK7 315 aa16.62■□□□□ 0.25
RXRB-202ENST00000374685 MMP25Q9NPA2 562 aa16.62■□□□□ 0.25
RXRB-202ENST00000374685 ATPIF1Q9UII2 106 aa16.62■□□□□ 0.25
RXRB-202ENST00000374685 MRTO4Q9UKD2 239 aaKnown RBP16.62■□□□□ 0.25
RXRB-202ENST00000374685 A0A0B4J293 547 aa16.62■□□□□ 0.25
RXRB-202ENST00000374685 EDNRAP25101 427 aa16.62■□□□□ 0.25
RXRB-202ENST00000374685 RPL18Q07020 188 aaKnown RBP16.62■□□□□ 0.25
RXRB-202ENST00000374685 TMEM65Q6PI78 240 aa16.62■□□□□ 0.25
RXRB-202ENST00000374685 FRMD6Q96NE9 622 aa16.62■□□□□ 0.25
RXRB-202ENST00000374685 NRIP3Q9NQ35 241 aa16.62■□□□□ 0.25
RXRB-202ENST00000374685 RASD1Q9Y272 281 aa16.62■□□□□ 0.25
RXRB-202ENST00000374685 A0A1W2PQM1 296 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 B4DXG7 233 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 H3BUI4 141 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 HIST1H2ABP04908 130 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 GLYR1Q49A26 553 aaPredicted RBP16.61■□□□□ 0.25
RXRB-202ENST00000374685 PWWP2BQ6NUJ5 590 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 HIST3H2AQ7L7L0 130 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 ZNF440Q8IYI8 595 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 Q8N402 240 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 OR1N1Q8NGS0 311 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 HIST1H2ACQ93077 130 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 CLDN23Q96B33 292 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 MED18Q9BUE0 208 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 AKIRIN1Q9H9L7 192 aaPredicted RBP16.61■□□□□ 0.25
RXRB-202ENST00000374685 GRHPRQ9UBQ7 328 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 SDK2Q58EX2 2172 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 TRBV2A0A0J9YWF9 115 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 SLC25A12O75746 678 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 PNMTP11086 282 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 SLC25A35Q3KQZ1 300 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 BICRALQ6AI39 1079 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 SAMD12Q8N8I0 201 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 ALG12Q9BV10 488 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 GALNT9Q9HCQ5 603 aa16.61■□□□□ 0.25
RXRB-202ENST00000374685 SCRG1O75711 98 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 HEXBP07686 556 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 GDI2P50395 445 aaKnown RBP16.6■□□□□ 0.25
RXRB-202ENST00000374685 FBXW4P57775 412 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 SCN1BQ07699 218 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 LGALS3BPQ08380 585 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 HLA-BQ31612 363 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 HDDC2Q7Z4H3 204 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 GPALPP1Q8IXQ4 340 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 HSD17B8Q92506 261 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 WDFY2Q96P53 400 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 OR14A2Q96R54 314 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 C11orf54Q9H0W9 315 aaPredicted RBP16.6■□□□□ 0.25
RXRB-202ENST00000374685 RNF121Q9H920 327 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 B3GAT2Q9NPZ5 323 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 MRPS7Q9Y2R9 242 aaKnown RBP16.6■□□□□ 0.25
RXRB-202ENST00000374685 TMEM72A0PK05 275 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 ANKRD61A6NGH8 418 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 ZNF354AO60765 605 aaPredicted RBP16.6■□□□□ 0.25
RXRB-202ENST00000374685 ELK1P19419 428 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 PRPS1P60891 318 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 SNRPD2P62316 118 aaKnown RBP16.6■□□□□ 0.25
RXRB-202ENST00000374685 ACSM1Q08AH1 577 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 TRIQKQ629K1 86 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 FAM71CQ8NEG0 241 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 OR14A16Q8NHC5 309 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 THAP4Q8WY91 577 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 NPAS1Q99742 590 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 SYT4Q9H2B2 425 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 EXTL2Q9UBQ6 330 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 VDAC3Q9Y277 283 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 TMEM265A0A087WTH1 108 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 HLA-DQA2P01906 255 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 OPN1LWP04000 364 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 F8A1P23610 371 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 EPHA8P29322 1005 aaPredicted RBP16.6■□□□□ 0.25
RXRB-202ENST00000374685 ACTC1P68032 377 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 ACTA1P68133 377 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 NKAIN1Q4KMZ8 207 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 ZBTB37Q5TC79 503 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 COX15Q7KZN9 410 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 COQ3Q9NZJ6 369 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 SLC23A1Q9UHI7 598 aa16.6■□□□□ 0.25
RXRB-202ENST00000374685 A0A1B0GTH9 108 aa16.59■□□□□ 0.25
RXRB-202ENST00000374685 PRR32B1ATL7 298 aa16.59■□□□□ 0.25
RXRB-202ENST00000374685 SHISA8B8ZZ34 492 aa16.59■□□□□ 0.25
RXRB-202ENST00000374685 CD14P08571 375 aa16.59■□□□□ 0.25
RXRB-202ENST00000374685 OR8G3PP0DMU2 310 aa16.59■□□□□ 0.25
RXRB-202ENST00000374685 INPP1P49441 399 aa16.59■□□□□ 0.25
RXRB-202ENST00000374685 DIO1P49895 249 aa16.59■□□□□ 0.25
RXRB-202ENST00000374685 GBX2P52951 348 aaPredicted RBP16.59■□□□□ 0.25
RXRB-202ENST00000374685 PPP3R1P63098 170 aa16.59■□□□□ 0.25
RXRB-202ENST00000374685 SLITRK4Q8IW52 837 aa16.59■□□□□ 0.25
RXRB-202ENST00000374685 UBASH3BQ8TF42 649 aa16.59■□□□□ 0.25
RXRB-202ENST00000374685 PGLYRP3Q96LB9 341 aa16.59■□□□□ 0.25
RXRB-202ENST00000374685 SLC25A18Q9H1K4 315 aa16.59■□□□□ 0.25
RXRB-202ENST00000374685 GAREM1Q9H706 876 aa16.59■□□□□ 0.25
RXRB-202ENST00000374685 NCDNQ9UBB6 729 aa16.59■□□□□ 0.25
RXRB-202ENST00000374685 IKZF2Q9UKS7 526 aa16.59■□□□□ 0.25
RXRB-202ENST00000374685 ACOD1A6NK06 481 aa16.59■□□□□ 0.25
RXRB-202ENST00000374685 SLC22A5O76082 557 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms