RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ZNF524Q96C55 264 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 OMA1Q96E52 524 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 TSSK2Q96PF2 358 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 RTN4RQ9BZR6 473 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 ADAM19Q9H013 955 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 HDHD2Q9H0R4 259 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 C12orf10Q9HB07 376 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 SRA1Q9HD15 236 aaKnown RBP10.97□□□□□ -0.65
HMGCL-202ENST00000374487 B3GAT2Q9NPZ5 323 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 INIPQ9NRY2 104 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 CYSLTR2Q9NS75 346 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 CTSFQ9UBX1 484 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 COPS3Q9UNS2 423 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 HEATR5AQ86XA9 2040 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 A0A0G2JMP0 313 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 A0A0X1KG70 313 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 A0A1W2PNU3 283 aaPredicted RBP10.97□□□□□ -0.65
HMGCL-202ENST00000374487 ALG1L2C9J202 215 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 PSMD9O00233 223 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 TO15178 435 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 TSPAN2O60636 221 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 ATP6V1G1O75348 118 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 HLA-DQB1P01920 261 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 PGCP20142 388 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 ABCD3P28288 659 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 PSMB10P40306 273 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 MAP2K3P46734 347 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 RPL18Q07020 188 aaKnown RBP10.97□□□□□ -0.65
HMGCL-202ENST00000374487 RIN1Q13671 783 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 QPRTQ15274 297 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 KCNJ8Q15842 424 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 ZNF57Q68EA5 555 aaPredicted RBP10.97□□□□□ -0.65
HMGCL-202ENST00000374487 LANCL3Q6ZV70 420 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 FAM122BQ7Z309 247 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 ZNF511Q8NB15 262 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 OR4M2Q8NGB6 313 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 TRMT10AQ8TBZ6 339 aaKnown RBP10.97□□□□□ -0.65
HMGCL-202ENST00000374487 FRMD6Q96NE9 622 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 CNTNAP3BQ96NU0 1288 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 KLHDC3Q9BQ90 382 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 CNTNAP3Q9BZ76 1288 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 ZNF768Q9H5H4 540 aaKnown RBP10.97□□□□□ -0.65
HMGCL-202ENST00000374487 CCDC86Q9H6F5 360 aaKnown RBP10.97□□□□□ -0.65
HMGCL-202ENST00000374487 TEKT2Q9UIF3 430 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 ZNF221Q9UK13 617 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 MOKQ9UQ07 419 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 PCDHGA1Q9Y5H4 931 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 NPFFR2Q9Y5X5 522 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 LAMA5O15230 3695 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 TRAV1-2A0A0B4J238 106 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 A0A1W2PQD3 144 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 OR6C76A6NM76 312 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 B4DXG7 233 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 EIF4E2O60573 245 aaKnown RBP10.96□□□□□ -0.65
HMGCL-202ENST00000374487 GATBO75879 557 aaKnown RBP10.96□□□□□ -0.65
HMGCL-202ENST00000374487 MT-CO3P00414 261 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 PSKH1P11801 424 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 GP1BBP13224 206 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 UQCRC1P31930 480 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 KIR2DL3P43628 341 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 SLC25A1P53007 311 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 PNLIPRP2P54317 469 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 LTBQ06643 244 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 TOMM34Q15785 309 aaPredicted RBP10.96□□□□□ -0.65
HMGCL-202ENST00000374487 SLC25A35Q3KQZ1 300 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 EMC4Q5J8M3 183 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 RDH10Q8IZV5 341 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 LRRC75AQ8NAA5 344 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 DNAJA3Q96EY1 480 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 UBL7Q96S82 380 aaPredicted RBP10.96□□□□□ -0.65
HMGCL-202ENST00000374487 PDCD1LG2Q9BQ51 273 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 RNF121Q9H920 327 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 FKRPQ9H9S5 495 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 SRPK3Q9UPE1 567 aa10.96□□□□□ -0.65
HMGCL-202ENST00000374487 SEC16AO15027 2179 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 FAM240BA0A1B0GVZ2 78 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 ZNF879B4DU55 563 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 LYRM1O43325 122 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 SCO2O43819 266 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 CDC40O60508 579 aaKnown RBP eCLIP10.96□□□□□ -0.66
HMGCL-202ENST00000374487 PAHP00439 452 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 EIF4EP06730 217 aaKnown RBP10.96□□□□□ -0.66
HMGCL-202ENST00000374487 TACSTD2P09758 323 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 RBMS1P29558 406 aaKnown RBP10.96□□□□□ -0.66
HMGCL-202ENST00000374487 THBS2P35442 1172 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 PITPNBP48739 271 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 DUSP3P51452 185 aaPredicted RBP10.96□□□□□ -0.66
HMGCL-202ENST00000374487 CAMK2BQ13554 666 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 CBFBQ13951 182 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 LINC01590Q5TEZ4 76 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 TMEM71Q6P5X7 295 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 SLC16A9Q7RTY1 509 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 NUP54Q7Z3B4 507 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 DTX3Q8N9I9 347 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 OR2T4Q8NH00 348 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 SLC25A36Q96CQ1 311 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 ADAD1Q96M93 576 aaKnown RBP10.96□□□□□ -0.66
HMGCL-202ENST00000374487 OR14A2Q96R54 314 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 WACQ9BTA9 647 aa10.96□□□□□ -0.66
HMGCL-202ENST00000374487 RBFOX1Q9NWB1 397 aaKnown RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms