RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 COX4I1P13073 169 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 CD247P20963 164 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 APOBEC3AP31941 199 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 NTF4P34130 210 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 PDLIM4P50479 330 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 P2RY4P51582 365 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 SEC24CP53992 1094 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 CDH12P55289 794 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 ZNF613Q6PF04 617 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 OR6T1Q8NGN1 323 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 MSI2Q96DH6 328 aaKnown RBP16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 WFDC6Q9BQY6 131 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 PIMREGQ9BSJ6 248 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 C1QTNF6Q9BXI9 259 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 AP3M1Q9Y2T2 418 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 FKBP7Q9Y680 259 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 CPSF4LA6NMK7 179 aaKnown RBP16.74■□□□□ 0.27
TRAPPC3-204ENST00000373166 VWC2LB2RUY7 222 aa16.74■□□□□ 0.27
TRAPPC3-204ENST00000373166 AIM2O14862 343 aa16.74■□□□□ 0.27
TRAPPC3-204ENST00000373166 TPST2O60704 377 aa16.74■□□□□ 0.27
TRAPPC3-204ENST00000373166 APEHP13798 732 aaKnown RBP16.74■□□□□ 0.27
TRAPPC3-204ENST00000373166 NR4A2P43354 598 aa16.74■□□□□ 0.27
TRAPPC3-204ENST00000373166 MFSD13AQ14CX5 517 aa16.74■□□□□ 0.27
TRAPPC3-204ENST00000373166 GABRA6Q16445 453 aa16.74■□□□□ 0.27
TRAPPC3-204ENST00000373166 ENTPD8Q5MY95 495 aa16.74■□□□□ 0.27
TRAPPC3-204ENST00000373166 OR2T12Q8NG77 320 aa16.74■□□□□ 0.27
TRAPPC3-204ENST00000373166 TAAR8Q969N4 342 aa16.74■□□□□ 0.27
TRAPPC3-204ENST00000373166 ZNF583Q96ND8 569 aa16.74■□□□□ 0.27
TRAPPC3-204ENST00000373166 ZNF385AQ96PM9 386 aaKnown RBP16.74■□□□□ 0.27
TRAPPC3-204ENST00000373166 BAG5Q9UL15 447 aa16.74■□□□□ 0.27
TRAPPC3-204ENST00000373166 M0R082 166 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 CHP2O43745 196 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 FZD7O75084 574 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 KRT33AO76009 404 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 GRPRP30550 384 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 LSP1P33241 339 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 IL1RL1Q01638 556 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 NPTX1Q15818 432 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 TSPO2Q5TGU0 170 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 CREB3L2Q70SY1 520 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 ABHD12BQ7Z5M8 362 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 CPLX4Q7Z7G2 160 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 ZIC4Q8N9L1 334 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 POMGNT2Q8NAT1 580 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 OR6S1Q8NH40 331 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 ZNF417Q8TAU3 575 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 ZNF587Q96SQ5 575 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 TMEM43Q9BTV4 400 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 ASPNQ9BXN1 380 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 SLC7A10Q9NS82 523 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 USP22Q9UPT9 525 aa16.73■□□□□ 0.27
TRAPPC3-204ENST00000373166 ITGA5P08648 1049 aa16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 NQO1P15559 274 aaKnown RBP16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 ZNF43P17038 809 aa16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 CRYBA2P53672 197 aa16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 TGFBR3Q03167 851 aa16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 RUNX1T1Q06455 604 aa16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 C1DQ13901 141 aaKnown RBP16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 LRRC23Q53EV4 343 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 MICU2Q8IYU8 434 aa16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 C10orf53Q8N6V4 93 aa16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 ADPRHL1Q8NDY3 354 aa16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 C1orf162Q8NEQ5 155 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 ADAMTS16Q8TE57 1224 aa16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 OXGR1Q96P68 337 aa16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 EFCAB1Q9HAE3 211 aa16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 SEC14L4Q9UDX3 406 aa16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 CORINQ9Y5Q5 1042 aa16.72■□□□□ 0.27
TRAPPC3-204ENST00000373166 ELOVL7A1L3X0 281 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 TRAPPC13A5PLN9 417 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 GMNCA6NCL1 334 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 OR6C65A6NJZ3 312 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 PDLIM1O00151 329 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 AKAP8O43823 692 aaKnown RBP16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 TGFAP01135 160 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 CBLP22681 906 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 NUDT2P50583 147 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 GNGT1P63211 74 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 IQCCQ4KMZ1 466 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 C9orf135Q5VTT2 229 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 NIPAL3Q6P499 406 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 H1FNTQ75WM6 255 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 CARM1Q86X55 608 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 TREML1Q86YW5 311 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 RBM45Q8IUH3 476 aaKnown RBP16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 EPHX4Q8IUS5 362 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 C17orf78Q8N4C9 275 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 RFLNBQ8N5W9 214 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 WDR31Q8NA23 367 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 OR4D11Q8NGI4 311 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 CMTM5Q96DZ9 223 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 FBXO17Q96EF6 278 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 FOXN4Q96NZ1 517 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 PCDHAC1Q9H158 963 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 SLC7A7Q9UM01 511 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 RCE1Q9Y256 329 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 AMDHD2Q9Y303 409 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 SH3GLB1Q9Y371 365 aa16.71■□□□□ 0.27
TRAPPC3-204ENST00000373166 IGHV4-61A0A0C4DH41 118 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 LOC390937A0A1W2PQ73 354 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms