RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 TTC9Q92623 222 aa16.17■□□□□ 0.18
CTSA-204ENST00000372484 PDCD1LG2Q9BQ51 273 aa16.17■□□□□ 0.18
CTSA-204ENST00000372484 WDR54Q9H977 334 aa16.17■□□□□ 0.18
CTSA-204ENST00000372484 GPN3Q9UHW5 284 aaPredicted RBP16.17■□□□□ 0.18
CTSA-204ENST00000372484 ADAM30Q9UKF2 790 aa16.17■□□□□ 0.18
CTSA-204ENST00000372484 RALGAPA1Q6GYQ0 2036 aa16.17■□□□□ 0.18
CTSA-204ENST00000372484 TVP23AA6NH52 213 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 B4DXG7 233 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 OR2T1O43869 369 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 OR2J2O76002 312 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 DXOO77932 396 aaKnown RBP16.16■□□□□ 0.18
CTSA-204ENST00000372484 KLK3P07288 261 aaPredicted RBP16.16■□□□□ 0.18
CTSA-204ENST00000372484 CCL4P13236 92 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 OR10A3P58181 314 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 ZFP36L1Q07352 338 aaKnown RBP16.16■□□□□ 0.18
CTSA-204ENST00000372484 TIGD4Q8IY51 512 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 TEX19Q8NA77 164 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 ADAD1Q96M93 576 aaKnown RBP16.16■□□□□ 0.18
CTSA-204ENST00000372484 NECAB3Q96P71 396 aaPredicted RBP16.16■□□□□ 0.18
CTSA-204ENST00000372484 NPAS1Q99742 590 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 SMOC1Q9H4F8 434 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 MALT1Q9UDY8 824 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 NXT1Q9UKK6 140 aaKnown RBP16.16■□□□□ 0.18
CTSA-204ENST00000372484 VDAC3Q9Y277 283 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 LINC00854A0A1B0GVQ3 168 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 A0A1W2PPK0 400 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 PRR32B1ATL7 298 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 SSX4O60224 188 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 SLC19A2O60779 497 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 CD1AP06126 327 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 CYC1P08574 325 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 CSF3P09919 207 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 CCKBRP32239 447 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 SUMO3P55854 103 aaPredicted RBP16.16■□□□□ 0.18
CTSA-204ENST00000372484 RPL27P61353 136 aaKnown RBP16.16■□□□□ 0.18
CTSA-204ENST00000372484 TAB1Q15750 504 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 ACKR1Q16570 336 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 EEF1A1P5Q5VTE0 462 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 SLC6A19Q695T7 634 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 SFXN4Q6P4A7 337 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 TMEM105Q8N8V8 129 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 ZNF417Q8TAU3 575 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 ZNF587Q96SQ5 575 aaPredicted RBP16.16■□□□□ 0.18
CTSA-204ENST00000372484 CPAMD8Q8IZJ3 1885 aa16.16■□□□□ 0.18
CTSA-204ENST00000372484 FAM25AB3EWG3 89 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 FAM25CB3EWG5 89 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 FAM25GB3EWG6 89 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 PLPP3O14495 311 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 APEX1P27695 318 aaKnown RBP16.15■□□□□ 0.18
CTSA-204ENST00000372484 IL18Q14116 193 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 ZNF684Q5T5D7 378 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 METAP1DQ6UB28 335 aaPredicted RBP16.15■□□□□ 0.18
CTSA-204ENST00000372484 ARSKQ6UWY0 536 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 NRARPQ7Z6K4 114 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 KCTD12Q96CX2 325 aaKnown RBP16.15■□□□□ 0.18
CTSA-204ENST00000372484 SMAD5Q99717 465 aaKnown RBP16.15■□□□□ 0.18
CTSA-204ENST00000372484 TTYH2Q9BSA4 534 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 DEFB126Q9BYW3 111 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 FBXO4Q9UKT5 387 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 KLHDC2Q9Y2U9 406 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 PCDHGB2Q9Y5G2 931 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 TRIM3O75382 744 aaPredicted RBP16.15■□□□□ 0.18
CTSA-204ENST00000372484 ARL6IP5O75915 188 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 TACSTD2P09758 323 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 APOBEC1P41238 236 aaKnown RBP16.15■□□□□ 0.18
CTSA-204ENST00000372484 RPS11P62280 158 aaKnown RBP eCLIP16.15■□□□□ 0.18
CTSA-204ENST00000372484 BTBD16Q32M84 506 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 FAM220AQ7Z4H9 259 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 KCTD20Q7Z5Y7 419 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 CDC20BQ86Y33 519 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 OR10G3Q8NGC4 313 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 OR6N2Q8NGY6 317 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 SLC22A8Q8TCC7 542 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 MR1Q95460 341 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 OR14A2Q96R54 314 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 SOSTQ9BQB4 213 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 ULBP3Q9BZM4 244 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 TXNIPQ9H3M7 391 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 PPP1R3EQ9H7J1 279 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 PPP4R1LQ9P1A2 415 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 LAMP5Q9UJQ1 280 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 RASD1Q9Y272 281 aa16.15■□□□□ 0.18
CTSA-204ENST00000372484 KIF26BQ2KJY2 2108 aa16.14■□□□□ 0.17
CTSA-204ENST00000372484 NCOR1O75376 2440 aa16.14■□□□□ 0.17
CTSA-204ENST00000372484 PRSS37A4D1T9 235 aa16.14■□□□□ 0.17
CTSA-204ENST00000372484 SNPHO15079 494 aa16.14■□□□□ 0.17
CTSA-204ENST00000372484 GPRIN2O60269 458 aa16.14■□□□□ 0.17
CTSA-204ENST00000372484 GATBO75879 557 aaKnown RBP16.14■□□□□ 0.17
CTSA-204ENST00000372484 OR8G3PP0DMU2 310 aa16.14■□□□□ 0.17
CTSA-204ENST00000372484 RAB3BP20337 219 aa16.14■□□□□ 0.17
CTSA-204ENST00000372484 CD300CQ08708 224 aa16.14■□□□□ 0.17
CTSA-204ENST00000372484 P2RY14Q15391 338 aa16.14■□□□□ 0.17
CTSA-204ENST00000372484 DTWD2Q8NBA8 298 aa16.14■□□□□ 0.17
CTSA-204ENST00000372484 ZNF519Q8TB69 540 aa16.14■□□□□ 0.17
CTSA-204ENST00000372484 RNF138Q8WVD3 245 aa16.14■□□□□ 0.17
CTSA-204ENST00000372484 METTL7AQ9H8H3 244 aa16.14■□□□□ 0.17
CTSA-204ENST00000372484 WDR76Q9H967 626 aa16.14■□□□□ 0.17
CTSA-204ENST00000372484 MRPL39Q9NYK5 338 aaKnown RBP16.14■□□□□ 0.17
CTSA-204ENST00000372484 BDP1A6H8Y1 2624 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms