RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 FOXC1Q12948 553 aa23.62■■□□□ 1.37
ATPAF1-202ENST00000371937 TMPPEQ6ZT21 453 aa23.62■■□□□ 1.37
ATPAF1-202ENST00000371937 PXKQ7Z7A4 578 aa23.62■■□□□ 1.37
ATPAF1-202ENST00000371937 SULF2Q8IWU5 870 aa23.62■■□□□ 1.37
ATPAF1-202ENST00000371937 ACBD7Q8N6N7 88 aa23.62■■□□□ 1.37
ATPAF1-202ENST00000371937 MDS2Q8NDY4 140 aa23.62■■□□□ 1.37
ATPAF1-202ENST00000371937 ZPLD1Q8TCW7 415 aa23.62■■□□□ 1.37
ATPAF1-202ENST00000371937 KCNE4Q8WWG9 221 aa23.62■■□□□ 1.37
ATPAF1-202ENST00000371937 HAS2Q92819 552 aa23.62■■□□□ 1.37
ATPAF1-202ENST00000371937 NAA50Q9GZZ1 169 aaKnown RBP23.62■■□□□ 1.37
ATPAF1-202ENST00000371937 ZNF552Q9H707 407 aaPredicted RBP23.62■■□□□ 1.37
ATPAF1-202ENST00000371937 RPRD1BQ9NQG5 326 aaKnown RBP23.62■■□□□ 1.37
ATPAF1-202ENST00000371937 INPP5EQ9NRR6 644 aa23.62■■□□□ 1.37
ATPAF1-202ENST00000371937 MOKQ9UQ07 419 aa23.62■■□□□ 1.37
ATPAF1-202ENST00000371937 A0A1W2PNV4 684 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 ARHGEF9O43307 516 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 SP1P08047 785 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 SBK2P0C263 348 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 LIMS3P0CW19 117 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 LIMS4P0CW20 117 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 CD46P15529 392 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 DIO1P49895 249 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 DAP3P51398 398 aaKnown RBP23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 GGTLC2Q14390 218 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 SLC25A25Q6KCM7 469 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 PAQR6Q6TCH4 344 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 YRDCQ86U90 279 aaKnown RBP23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 P2RY8Q86VZ1 359 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 ALDH16A1Q8IZ83 802 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 GHDCQ8N2G8 530 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 POMGNT2Q8NAT1 580 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 FAM83FQ8NEG4 500 aaPredicted RBP23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 ZNF519Q8TB69 540 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 BCL7BQ9BQE9 202 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 OR2B2Q9GZK3 357 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 ENPP5Q9UJA9 477 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 H3BMQ9 156 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 TRAPPC6AO75865 159 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 CD36P16671 472 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 LIPAP38571 399 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 CCL11P51671 97 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 WNT4P56705 351 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 B3GALT5-AS1P59052 145 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 C19orf57Q0VDD7 668 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 OR2T4Q8NH00 348 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 ADGRL4Q9HBW9 690 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 ERVK13-1Q9NX77 482 aa23.61■■□□□ 1.37
ATPAF1-202ENST00000371937 KLRC4-KLRK1H3BQV0 150 aa23.6■■□□□ 1.37
ATPAF1-202ENST00000371937 SEC14L5O43304 696 aa23.6■■□□□ 1.37
ATPAF1-202ENST00000371937 NME2P1O60361 137 aa23.6■■□□□ 1.37
ATPAF1-202ENST00000371937 NME2P22392 152 aa23.6■■□□□ 1.37
ATPAF1-202ENST00000371937 ARG2P78540 354 aa23.6■■□□□ 1.37
ATPAF1-202ENST00000371937 LHFPL3Q86UP9 236 aa23.6■■□□□ 1.37
ATPAF1-202ENST00000371937 KDM8Q8N371 416 aa23.6■■□□□ 1.37
ATPAF1-202ENST00000371937 YIPF3Q9GZM5 350 aa23.6■■□□□ 1.37
ATPAF1-202ENST00000371937 PCDHGB7Q9Y5F8 929 aa23.6■■□□□ 1.37
ATPAF1-202ENST00000371937 A6NIZ1 184 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 NPIPA5E9PKD4 350 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 GLCEO94923 617 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 RAP1BP61224 184 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 RAP1AP62834 184 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 ACTC1P68032 377 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 ACTA1P68133 377 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 HSF1Q00613 529 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 DBPQ10586 325 aaPredicted RBP23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 ZNF239Q16600 458 aaKnown RBP23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 FAM205BPQ63HN1 556 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 TMEM99Q8N816 258 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 EXD3Q8N9H8 876 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 OR51L1Q8NGJ5 315 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 ZMYND19Q96E35 227 aaPredicted RBP23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 HES7Q9BYE0 225 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 NPIPA1Q9UND3 350 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 NOX1Q9Y5S8 564 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 PRSS37A4D1T9 235 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 C12orf71A8MTZ7 269 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 LINC01387J3KSC0 135 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 BCL10O95999 233 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 SCG5P05408 212 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 TGFBR2P37173 567 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 RGS6P49758 472 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 CSNK2A1P68400 391 aaPredicted RBP23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 SLC16A12Q6ZSM3 486 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 KLHL36Q8N4N3 616 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 OR6K6Q8NGW6 343 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 SMPDL3BQ92485 455 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 SFXN2Q96NB2 322 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 CNN2Q99439 309 aaKnown RBP23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 PTTG2Q9NZH5 202 aa23.59■■□□□ 1.37
ATPAF1-202ENST00000371937 DAPL1A0PJW8 107 aa23.58■■□□□ 1.37
ATPAF1-202ENST00000371937 EIF1BO60739 113 aaKnown RBP23.58■■□□□ 1.37
ATPAF1-202ENST00000371937 GABARAPO95166 117 aa23.58■■□□□ 1.37
ATPAF1-202ENST00000371937 MRPL3P09001 348 aaKnown RBP23.58■■□□□ 1.37
ATPAF1-202ENST00000371937 HLA-DOBP13765 273 aa23.58■■□□□ 1.37
ATPAF1-202ENST00000371937 POU3F1Q03052 451 aaPredicted RBP23.58■■□□□ 1.37
ATPAF1-202ENST00000371937 MLLT11Q13015 90 aaPredicted RBP23.58■■□□□ 1.37
ATPAF1-202ENST00000371937 SLC35D2Q76EJ3 337 aa23.58■■□□□ 1.37
ATPAF1-202ENST00000371937 OR10H4Q8NGA5 316 aa23.58■■□□□ 1.37
ATPAF1-202ENST00000371937 OR52N1Q8NH53 320 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms