RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 JKAMPQ9P055 326 aa14.16□□□□□ -0.14
PFDN4-201ENST00000371419 SEC14L4Q9UDX3 406 aa14.16□□□□□ -0.14
PFDN4-201ENST00000371419 TMEFF2Q9UIK5 374 aaPredicted RBP14.16□□□□□ -0.14
PFDN4-201ENST00000371419 TESMINQ9Y4I5 508 aa14.16□□□□□ -0.14
PFDN4-201ENST00000371419 TNFRSF11BO00300 401 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 CLDN1O95832 211 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 CGAP01215 116 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 PRKACGP22612 351 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 RRM2P31350 389 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 SPIBQ01892 262 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 PMS2P3Q13401 168 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 FBXL19-AS1Q494R0 122 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 FGD3Q5JSP0 725 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 NUFIP2Q7Z417 695 aaKnown RBP14.15□□□□□ -0.14
PFDN4-201ENST00000371419 THAP5Q7Z6K1 395 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 GALNT5Q7Z7M9 940 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 GPAT4Q86UL3 456 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 SETD9Q8NE22 299 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 OR9K2Q8NGE7 335 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 SLC7A13Q8TCU3 470 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 GIPC3Q8TF64 312 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 SGTBQ96EQ0 304 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 LRRC46Q96FV0 321 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 MUS81Q96NY9 551 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 PLSCR4Q9NRQ2 329 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 KIF17Q9P2E2 1029 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 ZNF229Q9UJW7 825 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 HSPE1-MOB4S4R3N1 261 aa14.15□□□□□ -0.14
PFDN4-201ENST00000371419 A0A087WUU8 490 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 A0A087WXM4 84 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 LOC100130705A0A1B0GUX0 176 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 TRIM64A6NGJ6 449 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 A8MXE2 369 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 OR7A10O76100 309 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 GADD45GO95257 159 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 HIST1H2ABP04908 130 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 ANXA8P13928 327 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 TFF3Q07654 80 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 POU4F3Q15319 338 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 FAHD1Q6P587 224 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 PODNL1Q6PEZ8 512 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 MBOAT2Q6ZWT7 520 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 HIST3H2AQ7L7L0 130 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 RRM2BQ7LG56 351 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 SLC46A3Q7Z3Q1 461 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 LUZP2Q86TE4 346 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 NRMQ8IXM6 262 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 ATG16L2Q8NAA4 619 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 OR5J2Q8NH18 312 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 OR52J3Q8NH60 311 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 HIST1H2ACQ93077 130 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 OPN3Q9H1Y3 402 aaPredicted RBP14.14□□□□□ -0.15
PFDN4-201ENST00000371419 C12orf49Q9H741 205 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 C20orf141Q9NUB4 165 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 NOSIPQ9Y314 301 aaKnown RBP14.14□□□□□ -0.15
PFDN4-201ENST00000371419 FLVCR1Q9Y5Y0 555 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 LYVE1Q9Y5Y7 322 aa14.14□□□□□ -0.15
PFDN4-201ENST00000371419 PRSS44E7EML9 344 aa14.13□□□□□ -0.15
PFDN4-201ENST00000371419 PIP5K1CO60331 668 aa14.13□□□□□ -0.15
PFDN4-201ENST00000371419 TFAP2AP05549 437 aa14.13□□□□□ -0.15
PFDN4-201ENST00000371419 IFI30P13284 250 aa14.13□□□□□ -0.15
PFDN4-201ENST00000371419 FUT1P19526 365 aa14.13□□□□□ -0.15
PFDN4-201ENST00000371419 DAPP51397 102 aa14.13□□□□□ -0.15
PFDN4-201ENST00000371419 HMGA2P52926 109 aa14.13□□□□□ -0.15
PFDN4-201ENST00000371419 LSM11P83369 360 aaKnown RBP eCLIP14.13□□□□□ -0.15
PFDN4-201ENST00000371419 IL1RL1Q01638 556 aa14.13□□□□□ -0.15
PFDN4-201ENST00000371419 PRKCDQ05655 676 aa14.13□□□□□ -0.15
PFDN4-201ENST00000371419 TOP3AQ13472 1001 aaPredicted RBP14.13□□□□□ -0.15
PFDN4-201ENST00000371419 KEAP1Q14145 624 aa14.13□□□□□ -0.15
PFDN4-201ENST00000371419 RBM48Q5RL73 367 aaKnown RBP14.13□□□□□ -0.15
PFDN4-201ENST00000371419 KDM8Q8N371 416 aa14.13□□□□□ -0.15
PFDN4-201ENST00000371419 LRRC17Q8N6Y2 441 aa14.13□□□□□ -0.15
PFDN4-201ENST00000371419 ZNF610Q8N9Z0 462 aa14.13□□□□□ -0.15
PFDN4-201ENST00000371419 BPIFA2Q96DR5 249 aa14.13□□□□□ -0.15
PFDN4-201ENST00000371419 OXGR1Q96P68 337 aa14.13□□□□□ -0.15
PFDN4-201ENST00000371419 KRT84Q9NSB2 600 aa14.13□□□□□ -0.15
PFDN4-201ENST00000371419 FOXD3Q9UJU5 478 aaPredicted RBP14.13□□□□□ -0.15
PFDN4-201ENST00000371419 TRBV4-1A0A0J9YWV2 114 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 LOC102725191A0A1B0GVB3 256 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 TRIM64CA6NLI5 447 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 MS4A18H0YCH9 400 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 PLPP3O14495 311 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 OR6A2O95222 327 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 CLIC3O95833 236 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 ASAH2BP0C7U1 165 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 ATP6V1B1P15313 513 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 ZNF43P17038 809 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 OR3A2P47893 321 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 PUDPQ08623 228 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 C1DQ13901 141 aaKnown RBP14.12□□□□□ -0.15
PFDN4-201ENST00000371419 MS4A18Q3C1V0 323 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 ZNF691Q5VV52 312 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 CREB3L2Q70SY1 520 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 NANOGNBQ7Z5D8 188 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 CDK20Q8IZL9 346 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 OR4C15Q8NGM1 316 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 LIPHQ8WWY8 451 aa14.12□□□□□ -0.15
PFDN4-201ENST00000371419 HDAC2Q92769 488 aaKnown RBP14.12□□□□□ -0.15
PFDN4-201ENST00000371419 RNASE6Q93091 150 aaKnown RBP14.12□□□□□ -0.15
PFDN4-201ENST00000371419 FUZQ9BT04 418 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms