RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 ELF4Q99607 663 aaPredicted RBP26.26■■□□□ 1.79
SSBP3-204ENST00000371320 SLC25A18Q9H1K4 315 aa26.26■■□□□ 1.79
SSBP3-204ENST00000371320 SEMA5BQ9P283 1151 aa26.26■■□□□ 1.79
SSBP3-204ENST00000371320 MRM2Q9UI43 246 aaKnown RBP26.26■■□□□ 1.79
SSBP3-204ENST00000371320 CAMK2AQ9UQM7 478 aa26.26■■□□□ 1.79
SSBP3-204ENST00000371320 BOLA1Q9Y3E2 137 aa26.26■■□□□ 1.79
SSBP3-204ENST00000371320 SEC16AO15027 2179 aa26.25■■□□□ 1.79
SSBP3-204ENST00000371320 TRAV36DV7A0A075B6V5 113 aa26.25■■□□□ 1.79
SSBP3-204ENST00000371320 ANKRD61A6NGH8 418 aa26.25■■□□□ 1.79
SSBP3-204ENST00000371320 CDC40O60508 579 aaKnown RBP eCLIP26.25■■□□□ 1.79
SSBP3-204ENST00000371320 BGLAPP02818 100 aa26.25■■□□□ 1.79
SSBP3-204ENST00000371320 PGCP20142 388 aa26.25■■□□□ 1.79
SSBP3-204ENST00000371320 GPLD1P80108 840 aa26.25■■□□□ 1.79
SSBP3-204ENST00000371320 RNASE12Q5GAN4 147 aaKnown RBP26.25■■□□□ 1.79
SSBP3-204ENST00000371320 BAIAP2L2Q6UXY1 529 aa26.25■■□□□ 1.79
SSBP3-204ENST00000371320 TOMM5Q8N4H5 51 aa26.25■■□□□ 1.79
SSBP3-204ENST00000371320 HSD17B8Q92506 261 aa26.25■■□□□ 1.79
SSBP3-204ENST00000371320 DNAJA3Q96EY1 480 aa26.25■■□□□ 1.79
SSBP3-204ENST00000371320 GP1BBP13224 206 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 ABCD3P28288 659 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 BTCP35070 178 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 MAGEB1P43366 347 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 AFF3P51826 1226 aaKnown RBP26.24■■□□□ 1.79
SSBP3-204ENST00000371320 DGCR2P98153 550 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 UBE2NLQ5JXB2 153 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 LIPNQ5VXI9 398 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 GALNT9Q9HCQ5 603 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 ING3Q9NXR8 418 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 LAMP5Q9UJQ1 280 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 USP34Q70CQ2 3546 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 BCAT2O15382 392 aaPredicted RBP26.24■■□□□ 1.79
SSBP3-204ENST00000371320 UPK3AO75631 287 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 SLC25A12O75746 678 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 PRKCAP17252 672 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 C1QL3Q5VWW1 255 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 ZNF433Q8N7K0 673 aaPredicted RBP26.24■■□□□ 1.79
SSBP3-204ENST00000371320 ASCC1Q8N9N2 400 aaKnown RBP26.24■■□□□ 1.79
SSBP3-204ENST00000371320 ADAMTS14Q8WXS8 1223 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 GFI1Q99684 422 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 FGF21Q9NSA1 209 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 MCUBQ9NWR8 336 aa26.24■■□□□ 1.79
SSBP3-204ENST00000371320 PCDHGA9Q9Y5G4 932 aaKnown RBP26.24■■□□□ 1.79
SSBP3-204ENST00000371320 ITGA10O75578 1167 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 PNLIPRP2P54317 469 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 STARD6P59095 220 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 MRPL28Q13084 256 aaKnown RBP26.23■■□□□ 1.79
SSBP3-204ENST00000371320 ALKBH1Q13686 389 aaKnown RBP26.23■■□□□ 1.79
SSBP3-204ENST00000371320 HES5Q5TA89 166 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 AKAP1Q92667 903 aaKnown RBP eCLIP26.23■■□□□ 1.79
SSBP3-204ENST00000371320 MAP6Q96JE9 813 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 CMTM3Q96MX0 182 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 TSPAN10Q9H1Z9 355 aaPredicted RBP26.23■■□□□ 1.79
SSBP3-204ENST00000371320 SYT4Q9H2B2 425 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 IFITM5A6NNB3 132 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 IQCJ-SCHIP1C9J366 451 aaPredicted RBP26.23■■□□□ 1.79
SSBP3-204ENST00000371320 ARHGEF9O43307 516 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 CBFBQ13951 182 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 EEF1A1P5Q5VTE0 462 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 PRSS42Q7Z5A4 293 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 SPEM1Q8N4L4 309 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 OR6N2Q8NGY6 317 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 OR5AK2Q8NH90 309 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 DNASE2BQ8WZ79 361 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 ZNF501Q96CX3 271 aaPredicted RBP26.23■■□□□ 1.79
SSBP3-204ENST00000371320 TMEM246Q9BRR3 403 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 DPAGT1Q9H3H5 408 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 PLSCR3Q9NRY6 295 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 TAS2R5Q9NYW4 299 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 IKZF2Q9UKS7 526 aa26.23■■□□□ 1.79
SSBP3-204ENST00000371320 A0A087WV48 116 aa26.22■■□□□ 1.79
SSBP3-204ENST00000371320 OR6C76A6NM76 312 aa26.22■■□□□ 1.79
SSBP3-204ENST00000371320 AIPO00170 330 aa26.22■■□□□ 1.79
SSBP3-204ENST00000371320 KMT5CQ86Y97 462 aa26.22■■□□□ 1.79
SSBP3-204ENST00000371320 SIAH3Q8IW03 269 aa26.22■■□□□ 1.79
SSBP3-204ENST00000371320 SLC25A36Q96CQ1 311 aa26.22■■□□□ 1.79
SSBP3-204ENST00000371320 SHDQ96IW2 340 aa26.22■■□□□ 1.79
SSBP3-204ENST00000371320 KLHL15Q96M94 604 aa26.22■■□□□ 1.79
SSBP3-204ENST00000371320 PRO3102Q9H379 93 aa26.22■■□□□ 1.79
SSBP3-204ENST00000371320 WDR76Q9H967 626 aa26.22■■□□□ 1.79
SSBP3-204ENST00000371320 FRRS1LQ9P0K9 344 aa26.22■■□□□ 1.79
SSBP3-204ENST00000371320 C11orf98E9PRG8 122 aa26.21■■□□□ 1.79
SSBP3-204ENST00000371320 SCO2O43819 266 aa26.21■■□□□ 1.79
SSBP3-204ENST00000371320 AKR7A3O95154 331 aa26.21■■□□□ 1.79
SSBP3-204ENST00000371320 ABHD16AO95870 558 aa26.21■■□□□ 1.79
SSBP3-204ENST00000371320 YOD1Q5VVQ6 348 aaPredicted RBP26.21■■□□□ 1.79
SSBP3-204ENST00000371320 LANCL3Q6ZV70 420 aa26.21■■□□□ 1.79
SSBP3-204ENST00000371320 MAMDC2Q7Z304 686 aaPredicted RBP26.21■■□□□ 1.79
SSBP3-204ENST00000371320 CMTM4Q8IZR5 234 aa26.21■■□□□ 1.79
SSBP3-204ENST00000371320 ANKRD10Q9NXR5 420 aa26.21■■□□□ 1.79
SSBP3-204ENST00000371320 CTSFQ9UBX1 484 aa26.21■■□□□ 1.79
SSBP3-204ENST00000371320 EML5Q05BV3 1969 aa26.21■■□□□ 1.79
SSBP3-204ENST00000371320 WDR74Q6RFH5 385 aaPredicted RBP26.21■■□□□ 1.79
SSBP3-204ENST00000371320 PM20D2Q8IYS1 436 aa26.21■■□□□ 1.79
SSBP3-204ENST00000371320 ZNF441Q8N8Z8 693 aa26.21■■□□□ 1.79
SSBP3-204ENST00000371320 MNTQ99583 582 aa26.21■■□□□ 1.79
SSBP3-204ENST00000371320 V9GY05 133 aa26.21■■□□□ 1.79
SSBP3-204ENST00000371320 ASXL3Q9C0F0 2248 aa26.2■■□□□ 1.79
SSBP3-204ENST00000371320 LAMA1P25391 3075 aa26.2■■□□□ 1.78
SSBP3-204ENST00000371320 XKRYO14609 159 aa26.2■■□□□ 1.78
SSBP3-204ENST00000371320 DHFRP00374 187 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms