RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 ZZZ3Q8IYH5 903 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 BOLLQ8N9W6 283 aaKnown RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 CYB561A3Q8NBI2 242 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 FAM83FQ8NEG4 500 aaPredicted RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 ISL2Q96A47 359 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 ALKBH3Q96Q83 286 aaPredicted RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 NPAS1Q99742 590 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 ZNF251Q9BRH9 671 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 CCDC90BQ9GZT6 254 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 PIGUQ9H490 435 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 MMP25Q9NPA2 562 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 SDR39U1Q9NRG7 319 aaPredicted RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 RASSF1Q9NS23 344 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 ENPP5Q9UJA9 477 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 ERRFI1Q9UJM3 462 aaPredicted RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 ADAM29Q9UKF5 820 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 HRH3Q9Y5N1 445 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 SLC22A20A6NK97 555 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 CLDN25C9JDP6 229 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 MRPL33O75394 65 aaKnown RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 DXOO77932 396 aaKnown RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 SCGB1D2O95969 90 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 CDK1P06493 297 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 CHRM4P08173 479 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 PATE4P0C8F1 98 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 BMP7P18075 431 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 IL11P20809 199 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 ESRRGP62508 458 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 SQSTM1Q13501 440 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 EFR3AQ14156 821 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 ZNF273Q14593 569 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 SOWAHCQ53LP3 525 aaPredicted RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 CYBRD1Q53TN4 286 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 ZBTB37Q5TC79 503 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 SLC30A6Q6NXT4 461 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 B3GLCTQ6Y288 498 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 TSPAN14Q8NG11 270 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 RP9Q8TA86 221 aaKnown RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 NEU1Q99519 415 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 TBX5Q99593 518 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 VRK1Q99986 396 aaPredicted RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 CHID1Q9BWS9 393 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 SSU72Q9NP77 194 aaKnown RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 NANSQ9NR45 359 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 MED29Q9NX70 200 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 ANAPC2Q9UJX6 822 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 WIF1Q9Y5W5 379 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 A0A1W2PPL8 197 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 ISPDA4D126 451 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 TMEM210A6NLX4 147 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 J3KRW8 73 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 DVL2O14641 736 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 TMEM127O75204 238 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 BCAS2O75934 225 aaPredicted RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 RNF224P0DH78 156 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 S100PP25815 95 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 SMSP52788 366 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 TAF13Q15543 124 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 NRF1Q16656 503 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 ZNF630Q2M218 657 aaPredicted RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 TMEM44Q2T9K0 475 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 RSBN1Q5VWQ0 802 aaPredicted RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 HEPHL1Q6MZM0 1159 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 NIPAL3Q6P499 406 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 XKRXQ6PP77 449 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 HIPK1Q86Z02 1210 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 M1APQ8TC57 530 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 S100ZQ8WXG8 99 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 KLHDC3Q9BQ90 382 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 ALX4Q9H161 411 aaPredicted RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 MTHFD2LQ9H903 347 aaPredicted RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 HMG20AQ9NP66 347 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 VSX1Q9NZR4 365 aaPredicted RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 SLC7A7Q9UM01 511 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 EXO1Q9UQ84 846 aaKnown RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 GPR55Q9Y2T6 319 aaPredicted RBP6.36□□□□□ -1.39
USP1-202ENST00000371146 TRAV27A0A087WT01 109 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 FITM1A5D6W6 292 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 TMEM8BA6NDV4 472 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 CLCA1A8K7I4 914 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 XKRYO14609 159 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 NEURL1O76050 574 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 WISP3O95389 354 aaPredicted RBP6.35□□□□□ -1.39
USP1-202ENST00000371146 PTBP3O95758 552 aaKnown RBP6.35□□□□□ -1.39
USP1-202ENST00000371146 CST1P01037 141 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 IGKV1D-16P01601 117 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 HTR3AP46098 478 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 SLC6A9P48067 706 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 CLDN17P56750 224 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 RASGEF1BQ0VAM2 473 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 TUSC1Q2TAM9 212 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 OGFRL1Q5TC84 451 aaPredicted RBP6.35□□□□□ -1.39
USP1-202ENST00000371146 ZNF385CQ66K41 422 aaPredicted RBP6.35□□□□□ -1.39
USP1-202ENST00000371146 MRM1Q6IN84 353 aaKnown RBP6.35□□□□□ -1.39
USP1-202ENST00000371146 TBPL2Q6SJ96 375 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 ULK2Q8IYT8 1036 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 TMEM99Q8N816 258 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 MRPL48Q96GC5 212 aaKnown RBP6.35□□□□□ -1.39
USP1-202ENST00000371146 HSH2DQ96JZ2 352 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms