RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 SLC2A12Q8TD20 617 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 DOK4Q8TEW6 326 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 MS4A6EQ96DS6 147 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 SEC22AQ96IW7 307 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 CYYR1Q96J86 154 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 ZNF426Q9BUY5 554 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 ALX4Q9H161 411 aaPredicted RBP10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 GAREM1Q9H706 876 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 NIT2Q9NQR4 276 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 MUC22E2RYF6 1773 aaPredicted RBP10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 IFITM10A6NMD0 228 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 CEBPBP17676 345 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 GPR143P51810 404 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 INPP5JQ15735 1006 aaPredicted RBP10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 LRRC37A5PQ49AS3 106 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 FNDC3BQ53EP0 1204 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 ATPAF1Q5TC12 328 aaPredicted RBP10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 GLT8D1Q68CQ7 371 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 SLC48A1Q6P1K1 146 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 TMEM205Q6UW68 189 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 ZAR1Q86SH2 424 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 TIFAQ96CG3 184 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 EDEM2Q9BV94 578 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 FN3KRPQ9HA64 309 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 AHSPQ9NZD4 102 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 RCC2Q9P258 522 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 A0A0D9SG52 128 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 GGT3PA6NGU5 568 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 OR1F1O43749 312 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 RAB40ALP0C0E4 278 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 NR0B1P51843 470 aaKnown RBP10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 ST8SIA6P61647 398 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 DHRS2Q13268 280 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 GFOD2Q3B7J2 385 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 EXOSC6Q5RKV6 272 aaKnown RBP10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 LINC01590Q5TEZ4 76 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 TRAPPC5Q8IUR0 188 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 SLC35F2Q8IXU6 374 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 GJD3Q8N144 294 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 STEAP2Q8NFT2 490 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 CYB5D2Q8WUJ1 264 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 PPP1R1CQ8WVI7 109 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 RAB40AQ8WXH6 277 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 UBE2E3Q969T4 207 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 LINC00615Q96LM1 132 aaPredicted RBP10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 PELI2Q9HAT8 420 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 PRSS16Q9NQE7 514 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 SLC2A4RGQ9NR83 387 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 UQCC1Q9NVA1 299 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 MPDZO75970 2070 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 MCIDASD6RGH6 385 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 SSX5O60225 188 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 CLN5O75503 358 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 ABHD16AO95870 558 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 ITGA5P08648 1049 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 OR2T7P0C7T2 308 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 AGAP20933 346 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 CERS1P27544 350 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 ADH6P28332 368 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 C3orf33Q6P1S2 294 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 JAZF1Q86VZ6 243 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 OR2T27Q8NH04 317 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 OR8S1Q8NH09 359 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 FAM174AQ8TBP5 190 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 ELP5Q8TE02 316 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 HEATR5AQ86XA9 2040 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 FANCMQ8IYD8 2048 aa10.63□□□□□ -0.71
SMARCA1-201ENST00000371121 STX11O75558 287 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 PAK4O96013 591 aaPredicted RBP10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 KLK3P07288 261 aaPredicted RBP10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 ACTC1P68032 377 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 ACTA1P68133 377 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 BLOC1S1P78537 153 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 MRPS10P82664 201 aaKnown RBP10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 COL19A1Q14993 1142 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 MRPL2Q5T653 305 aaKnown RBP10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 MFSD12Q6NUT3 480 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 ANKRD16Q6P6B7 361 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 PARS2Q7L3T8 475 aaKnown RBP10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 DMRTC2Q8IXT2 367 aaPredicted RBP10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 NPEPL1Q8NDH3 523 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 OR52E2Q8NGJ4 325 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 OR2L2Q8NH16 312 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 OR4K13Q8NH42 304 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 TNFAIP8L1Q8WVP5 186 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 SEC11CQ9BY50 192 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 STARD7Q9NQZ5 370 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 GPN3Q9UHW5 284 aaPredicted RBP10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 TRBV5-5A0A0J9YX44 114 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 H7C4K7 107 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 EMC8O43402 210 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 TGM5O43548 720 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 FADS1O60427 444 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 DOK2O60496 412 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 CAPZA1P52907 286 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 LTBQ06643 244 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 ATXN7L3Q14CW9 347 aaPredicted RBP10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 GXYLT1Q4G148 440 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 C4orf46Q504U0 113 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 ACOT4Q8N9L9 421 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms