RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ELP5Q8TE02 316 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 GRHL3Q8TE85 626 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 NUDT11Q96G61 164 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 SLC19A3Q9BZV2 496 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 C12orf10Q9HB07 376 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 HHATLQ9HCP6 504 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 PLCXD1Q9NUJ7 323 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 CNIH4Q9P003 139 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 SNX5Q9Y5X3 404 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 HS3ST3B1Q9Y662 390 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 TEP1Q99973 2627 aaKnown RBP7.9□□□□□ -1.14
TPM3-213ENST00000368545 DOPEY1Q5JWR5 2465 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 SDK2Q58EX2 2172 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 MKRN2OSH3BPM6 223 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 FAM20BO75063 409 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 WBP4O75554 376 aaKnown RBP7.9□□□□□ -1.14
TPM3-213ENST00000368545 IGF2P01344 180 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 PNMTP11086 282 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 COX6A1P12074 109 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 GABRB1P18505 474 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 FMO3P31513 532 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 TTKP33981 857 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 CDH15P55291 814 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 CLDN6P56747 220 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 SNRPGP62308 76 aaKnown RBP7.9□□□□□ -1.14
TPM3-213ENST00000368545 ADAM8P78325 824 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 CDK5Q00535 292 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 KIRREL2Q6UWL6 708 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 APOOLQ6UXV4 268 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 PTCHD4Q6ZW05 846 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 TMPRSS11FQ6ZWK6 438 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 DTX1Q86Y01 620 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 SLC43A2Q8N370 569 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 ZNF540Q8NDQ6 660 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 OR8J1Q8NGP2 316 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 APH1BQ8WW43 257 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 ITFG2Q969R8 447 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 BPIFA2Q96DR5 249 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 Q96MT0 163 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 GPA33Q99795 319 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 DEFB126Q9BYW3 111 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 SPRY4Q9C004 299 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 MMP25Q9NPA2 562 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 CLN6Q9NWW5 311 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 IL20Q9NYY1 176 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 CAMK2AQ9UQM7 478 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 CARD8Q9Y2G2 431 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 CDH10Q9Y6N8 788 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 CREBBPQ92793 2442 aa7.9□□□□□ -1.14
TPM3-213ENST00000368545 A0A087WUJ7 227 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 hCG_1807616A0A1W2PRN6 198 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 TMEM200CA6NKL6 621 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 C21orf140B9A014 251 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 WWP2O00308 870 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 HCRTR2O43614 444 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 FADS1O60427 444 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 NADKO95544 446 aaPredicted RBP7.9□□□□□ -1.15
TPM3-213ENST00000368545 IFI30P13284 250 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 TCN2P20062 427 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 PGCP20142 388 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 GPR4P46093 362 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 ALDH3B2P48448 385 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 CCR4P51679 360 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 RPS15P62841 145 aaKnown RBP7.9□□□□□ -1.15
TPM3-213ENST00000368545 SLC35A2P78381 396 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 ZNF117Q03924 483 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 CBFBQ13951 182 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 SSPNQ14714 243 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 NDUFAF6Q330K2 333 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 NADK2Q4G0N4 442 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 TMEM236Q5W0B7 351 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 SLC30A6Q6NXT4 461 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 SLC22A25Q6T423 547 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 NDUFAF7Q7L592 441 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 SATL1Q86VE3 508 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 GATSQ8NAP1 163 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 OR52L1Q8NGH7 329 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 PFN4Q8NHR9 129 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 FANK1Q8TC84 345 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 CT55Q8WUE5 264 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 IMMP1LQ96LU5 166 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 SLC38A2Q96QD8 506 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 NODALQ96S42 347 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 POLDIP3Q9BY77 421 aaKnown RBP7.9□□□□□ -1.15
TPM3-213ENST00000368545 PCDHGB1Q9Y5G3 927 aa7.9□□□□□ -1.15
TPM3-213ENST00000368545 WDFY3Q8IZQ1 3526 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 NSG1A0A0A6YYJ2 146 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 UNC119BA6NIH7 251 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 SOCS6O14544 535 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 XPNPEP2O43895 674 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 RCBTB2O95199 551 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 SCGB1D1O95968 90 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 ICAM2P13598 275 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 P2RX1P51575 399 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 GINS1Q14691 196 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 NKAPLQ5M9Q1 402 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 SLC25A30Q5SVS4 291 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 MEDAGQ5VYS4 303 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 NUP54Q7Z3B4 507 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 MRGPREQ86SM8 312 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms