RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 SIGLEC7Q9Y286 467 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 HIF3AQ9Y2N7 669 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 HCFC1P51610 2035 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 A0A1W2PRG6 482 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 A1L4Q6 167 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 SLC35F4A4IF30 521 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 CLEC18AA5D8T8 446 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 WIPF3A6NGB9 483 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 ZNF726A6NNF4 738 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 MCIDASD6RGH6 385 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 PTP4A3O75365 173 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 BCL10O95999 233 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 ZNF26P17031 533 aaPredicted RBP12.31□□□□□ -0.44
TPM3-211ENST00000368531 FPR3P25089 353 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 OR3A2P47893 321 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 RPS4XP62701 263 aaKnown RBP12.31□□□□□ -0.44
TPM3-211ENST00000368531 ERVK-25P63136 954 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 ELF3P78545 371 aaPredicted RBP12.31□□□□□ -0.44
TPM3-211ENST00000368531 LGALS3BPQ08380 585 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 CAMK2DQ13557 499 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 GK3PQ14409 553 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 SLC25A35Q3KQZ1 300 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 CLEC18BQ6UXF7 455 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 TFAP2EQ6VUC0 442 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 STK32CQ86UX6 486 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 WDFY1Q8IWB7 410 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 ATG16L2Q8NAA4 619 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 LRRC75AQ8NAA5 344 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 CLEC18CQ8NCF0 446 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 FANK1Q8TC84 345 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 SAMD8Q96LT4 415 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 EGLN3Q9H6Z9 239 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 PARPBPQ9NWS1 579 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 KIF17Q9P2E2 1029 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 UPB1Q9UBR1 384 aa12.31□□□□□ -0.44
TPM3-211ENST00000368531 A8MXE2 369 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 MSTNO14793 375 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 RRP9O43818 475 aaKnown RBP12.3□□□□□ -0.44
TPM3-211ENST00000368531 KRT33AO76009 404 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 NDUFB2O95178 105 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 SOX14O95416 240 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 IGFBP1P08833 259 aaPredicted RBP12.3□□□□□ -0.44
TPM3-211ENST00000368531 TSPAN19P0C672 248 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 CD8BP10966 210 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 AGAP20933 346 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 ASCL1P50553 236 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 FXYD6P3P58550 94 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 PRPS1P60891 318 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 TAF11Q15544 211 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 TSPO2Q5TGU0 170 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 ZNF474Q6S9Z5 364 aaPredicted RBP12.3□□□□□ -0.44
TPM3-211ENST00000368531 NHLRC1Q6VVB1 395 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 THSD4Q6ZMP0 1018 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 KIF18BQ86Y91 864 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 HIPK1Q86Z02 1210 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 ZDHHC13Q8IUH4 622 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 PQLC1Q8N2U9 271 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 TMEM45BQ96B21 275 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 NRBF2Q96F24 287 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 KATNB1Q9BVA0 655 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 RBM24Q9BX46 236 aaKnown RBP12.3□□□□□ -0.44
TPM3-211ENST00000368531 POLDIP3Q9BY77 421 aaKnown RBP12.3□□□□□ -0.44
TPM3-211ENST00000368531 NDEL1Q9GZM8 345 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 OR52D1Q9H346 318 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 ZNF556Q9HAH1 456 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 SMURF2Q9HAU4 748 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 OAZ3Q9UMX2 235 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 ADAM18Q9Y3Q7 739 aa12.3□□□□□ -0.44
TPM3-211ENST00000368531 ARRDC5A6NEK1 342 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 H0YHG0 523 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 PDLIM1O00151 329 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 AKAP8O43823 692 aaKnown RBP12.29□□□□□ -0.44
TPM3-211ENST00000368531 SLC43A1O75387 559 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 PPP1R3DO95685 299 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 ANXA8P13928 327 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 GRNP28799 593 aaKnown RBP12.29□□□□□ -0.44
TPM3-211ENST00000368531 FAPQ12884 760 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 SNTB1Q13884 538 aaKnown RBP12.29□□□□□ -0.44
TPM3-211ENST00000368531 RCN1Q15293 331 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 TSC22D1Q15714 1073 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 ACKR1Q16570 336 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 RFX4Q33E94 735 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 ANKDD1AQ495B1 522 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 CLEC12AQ5QGZ9 265 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 C9orf135Q5VTT2 229 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 SMARCD3Q6STE5 483 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 KLHL17Q6TDP4 642 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 ZNF620Q6ZNG0 422 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 ASB10Q8WXI3 467 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 OR2M2Q96R28 347 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 DGCR6LQ9BY27 220 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 SLCO5A1Q9H2Y9 848 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 TXNIPQ9H3M7 391 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 FANCFQ9NPI8 374 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 SLC7A10Q9NS82 523 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 GALNT8Q9NY28 637 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 JKAMPQ9P055 326 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 ZNF346Q9UL40 294 aaKnown RBP12.29□□□□□ -0.44
TPM3-211ENST00000368531 IER3IP1Q9Y5U9 82 aa12.29□□□□□ -0.44
TPM3-211ENST00000368531 H3BN98 237 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms