RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 FKBP14Q9NWM8 211 aa8.95□□□□□ -0.98
TPM3-210ENST00000368530 IL20Q9NYY1 176 aa8.95□□□□□ -0.98
TPM3-210ENST00000368530 SPRR3Q9UBC9 169 aa8.95□□□□□ -0.98
TPM3-210ENST00000368530 ST6GALNAC2Q9UJ37 374 aa8.95□□□□□ -0.98
TPM3-210ENST00000368530 A0A087WUJ7 227 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 A0A1W2PQD3 144 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 EFCAB10A6NFE3 127 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 OR6C70A6NIJ9 312 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 FIGNL2A6NMB9 653 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 ALG1L2C9J202 215 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 RNF223E7ERA6 249 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 FADS1O60427 444 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 WDR1O75083 606 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 SEC14L2O76054 403 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 APOL3O95236 402 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 ADRA2AP08913 450 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 RFPL3SP0C7P2 107 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 BMP7P18075 431 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 PAX7P23759 505 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 GSTT1P30711 240 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 SLC6A8P48029 635 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 FXYD6P3P58550 94 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 ZNF91Q05481 1191 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 SLC10A1Q14973 349 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 TOMM34Q15785 309 aaPredicted RBP8.94□□□□□ -0.98
TPM3-210ENST00000368530 OCLNQ16625 522 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 SYT14P1Q58G82 188 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 TMEM201Q5SNT2 666 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 SLC35F1Q5T1Q4 408 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 GTF2IRD2BQ6EKJ0 949 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 OR5M10Q6IEU7 315 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 SMARCD3Q6STE5 483 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 LINC00114Q6XXX2 140 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 OAFQ86UD1 273 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 GTF2IRD2Q86UP8 949 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 C10orf53Q8N6V4 93 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 CLDN22Q8N7P3 220 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 OR2T33Q8NG76 320 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 ISOC1Q96CN7 298 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 DNAJA3Q96EY1 480 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 ZNF582Q96NG8 517 aaPredicted RBP8.94□□□□□ -0.98
TPM3-210ENST00000368530 TNFRSF13CQ96RJ3 184 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 ZNF426Q9BUY5 554 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 IFT27Q9BW83 186 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 TEX12Q9BXU0 123 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 UBQLN3Q9H347 655 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 HHATLQ9HCP6 504 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 GALNT9Q9HCQ5 603 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 COMMD3-BMI1R4GMX3 469 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 ABCA2Q9BZC7 2435 aa8.94□□□□□ -0.98
TPM3-210ENST00000368530 DNHD1Q96M86 4753 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 IGKV1D-42A0A075B6H8 117 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 KDM4EB2RXH2 506 aaPredicted RBP8.93□□□□□ -0.98
TPM3-210ENST00000368530 SURF4O15260 269 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 EIF4E2O60573 245 aaKnown RBP8.93□□□□□ -0.98
TPM3-210ENST00000368530 HCN1O60741 890 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 MRPS14O60783 128 aaKnown RBP8.93□□□□□ -0.98
TPM3-210ENST00000368530 NOL3O60936 208 aaKnown RBP8.93□□□□□ -0.98
TPM3-210ENST00000368530 RCBTB2O95199 551 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 PPP1R3DO95685 299 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 PNMTP11086 282 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 DBTP11182 482 aaKnown RBP8.93□□□□□ -0.98
TPM3-210ENST00000368530 NR4A1P22736 598 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 TACR3P29371 465 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 TTKP33981 857 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 PSPHP78330 225 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 SLC25A35Q3KQZ1 300 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 C1orf185Q5T7R7 199 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 RIPPLY2Q5TAB7 128 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 BICRALQ6AI39 1079 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 ATG4DQ86TL0 474 aaPredicted RBP8.93□□□□□ -0.98
TPM3-210ENST00000368530 IGFN1Q86VF2 1251 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 LRRC17Q8N6Y2 441 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 RELL2Q8NC24 303 aaPredicted RBP8.93□□□□□ -0.98
TPM3-210ENST00000368530 BBS1Q8NFJ9 593 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 OR5W2Q8NH69 310 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 PAQR8Q8TEZ7 354 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 DUSP19Q8WTR2 217 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 HGDQ93099 445 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 C12orf43Q96C57 262 aaKnown RBP8.93□□□□□ -0.98
TPM3-210ENST00000368530 TMCO6Q96DC7 493 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 SIGLEC11Q96RL6 698 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 PRRG3Q9BZD7 231 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 SACM1LQ9NTJ5 587 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 CRIM1Q9NZV1 1036 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.93□□□□□ -0.98
TPM3-210ENST00000368530 ICAM5Q9UMF0 924 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 SIGLEC7Q9Y286 467 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 RPL36Q9Y3U8 105 aaKnown RBP8.93□□□□□ -0.98
TPM3-210ENST00000368530 ABCA4P78363 2273 aa8.93□□□□□ -0.98
TPM3-210ENST00000368530 VPS13CQ709C8 3753 aa8.92□□□□□ -0.98
TPM3-210ENST00000368530 LRRC3CA6NJW4 275 aa8.92□□□□□ -0.98
TPM3-210ENST00000368530 FAM183AA6NL82 134 aa8.92□□□□□ -0.98
TPM3-210ENST00000368530 H3BMQ9 156 aa8.92□□□□□ -0.98
TPM3-210ENST00000368530 BHLHE40O14503 412 aa8.92□□□□□ -0.98
TPM3-210ENST00000368530 PTHP01270 115 aa8.92□□□□□ -0.98
TPM3-210ENST00000368530 HMGN1P05114 100 aa8.92□□□□□ -0.98
TPM3-210ENST00000368530 PGCP20142 388 aa8.92□□□□□ -0.98
TPM3-210ENST00000368530 PCSK6P29122 969 aa8.92□□□□□ -0.98
TPM3-210ENST00000368530 GRK5P34947 590 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms