RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 MARCH3Q86UD3 253 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 EXD3Q8N9H8 876 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 RHBDD1Q8TEB9 315 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 PHOX2BQ99453 314 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 MOV10Q9HCE1 1003 aaKnown RBP12.72□□□□□ -0.37
USF1-202ENST00000368020 MYO15AQ9UKN7 3530 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 SELENOFO60613 162 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 ZNF432O94892 652 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 IMPDH2P12268 514 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 ACP1P24666 158 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 CDKN2AP42771 156 aaKnown RBP12.71□□□□□ -0.37
USF1-202ENST00000368020 NR4A2P43354 598 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 MAP2K6P52564 334 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 CBX3Q13185 183 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 PRSS58Q8IYP2 241 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 RDH10Q8IZV5 341 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 OR5L2Q8NGL0 311 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 ST8SIA1Q92185 356 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 TAAR8Q969N4 342 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 KTI12Q96EK9 354 aaPredicted RBP12.71□□□□□ -0.37
USF1-202ENST00000368020 ZCCHC4Q9H5U6 513 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 RBFOX1Q9NWB1 397 aaKnown RBP12.71□□□□□ -0.37
USF1-202ENST00000368020 EXTL2Q9UBQ6 330 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 C19orf25Q9UFG5 118 aaPredicted RBP12.71□□□□□ -0.37
USF1-202ENST00000368020 ITGB1BP2Q9UKP3 347 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 ZNF281Q9Y2X9 895 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 KNTC1P50748 2209 aa12.71□□□□□ -0.37
USF1-202ENST00000368020 A0A1W2PRG6 482 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 CDC14CA4D256 554 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 IDSB3KWA1 339 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 SCRG1O75711 98 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 KRT8P05787 483 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 ATXN8OSP0DMR3 200 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 MYF5P13349 255 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 APEX1P27695 318 aaKnown RBP12.71□□□□□ -0.38
USF1-202ENST00000368020 MAP2K3P46734 347 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 PITPNAQ00169 270 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 EGR3Q06889 387 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 C17orf67Q0P5P2 114 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 QPRTQ15274 297 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 TAB1Q15750 504 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 HSD17B12Q53GQ0 312 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 RPTNQ6XPR3 784 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 ANKRD37Q7Z713 158 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 NAXDQ8IW45 347 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 OR51L1Q8NGJ5 315 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 KLHL15Q96M94 604 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 OR6C1Q96RD1 312 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 KCNJ15Q99712 375 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 CDC6Q99741 560 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 NRSN2Q9GZP1 204 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 INIPQ9NRY2 104 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 TAS2R10Q9NYW0 307 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 RASD1Q9Y272 281 aa12.71□□□□□ -0.38
USF1-202ENST00000368020 TMED7-TICAM2A0A0A6YYA0 188 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 C4orf47A7E2U8 309 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 PRKNO60260 465 aaPredicted RBP12.7□□□□□ -0.38
USF1-202ENST00000368020 SUSD5O60279 629 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 NPIPB7O75200 414 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 ALOX12BO75342 701 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 SERPINI2O75830 405 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 AHSA1O95433 338 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 IGHMP01871 453 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 ELK1P19419 428 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 THBS2P35442 1172 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 PITPNBP48739 271 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 EFNA3P52797 238 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 SELENBP1Q13228 472 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 GXYLT1Q4G148 440 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 ZNF684Q5T5D7 378 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 EEF1A1P5Q5VTE0 462 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 PYHIN1Q6K0P9 492 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 PLET1Q6UQ28 207 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 UNQ9370/PRO34162Q6UXP9 181 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 LANCL3Q6ZV70 420 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 CELF2-AS1Q8N7Q2 184 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 SAMD12Q8N8I0 201 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 IFI44Q8TCB0 444 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 GPR119Q8TDV5 335 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 TTC9Q92623 222 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 TSPAN32Q96QS1 320 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 C11orf54Q9H0W9 315 aaPredicted RBP12.7□□□□□ -0.38
USF1-202ENST00000368020 WDR76Q9H967 626 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 MARCH7Q9H992 704 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 ACOXLQ9NUZ1 547 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 TMED7Q9Y3B3 224 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 FKBP7Q9Y680 259 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 DMDP11532 3685 aa12.7□□□□□ -0.38
USF1-202ENST00000368020 A0A0G2JK05 382 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.69□□□□□ -0.38
USF1-202ENST00000368020 ANKUB1A6NFN9 424 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 ITGA10O75578 1167 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 CCNKO75909 580 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 OR6A2O95222 327 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 F13BP05160 661 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 DLX5P56178 289 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 LTBQ06643 244 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 MESTQ5EB52 335 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 C1orf140Q5VVS0 124 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 ZNF574Q6ZN55 896 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms