RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 PDLIM1O00151 329 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 SHOX2O60902 331 aaPredicted RBP8.18□□□□□ -1.1
MRPL55-216ENST00000366744 SERPINA1P01009 418 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 CRYAAP02489 173 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 MT-ND1P03886 318 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 SAGP10523 405 aaPredicted RBP8.18□□□□□ -1.1
MRPL55-216ENST00000366744 BMP4P12644 408 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 CSNK1A1P48729 337 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 DAP3P51398 398 aaKnown RBP8.18□□□□□ -1.1
MRPL55-216ENST00000366744 CRYBA2P53672 197 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 NKX6-1P78426 367 aaPredicted RBP8.18□□□□□ -1.1
MRPL55-216ENST00000366744 FOXD4Q12950 439 aaPredicted RBP8.18□□□□□ -1.1
MRPL55-216ENST00000366744 KRT72Q14CN4 511 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 TRAM2Q15035 370 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 TESK1Q15569 626 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 TBRG1Q3YBR2 411 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 HIKESHIQ53FT3 197 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 LSRQ86X29 649 aaPredicted RBP8.18□□□□□ -1.1
MRPL55-216ENST00000366744 TGIF2LYQ8IUE0 185 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 CDK20Q8IZL9 346 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 OFCC1Q8IZS5 231 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 ZIC4Q8N9L1 334 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 OR4D11Q8NGI4 311 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 OR1K1Q8NGR3 316 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 TMEM255BQ8WV15 326 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 SGTBQ96EQ0 304 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 TRMT61AQ96FX7 289 aaKnown RBP8.18□□□□□ -1.1
MRPL55-216ENST00000366744 HSH2DQ96JZ2 352 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 OR2M2Q96R28 347 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 WFDC6Q9BQY6 131 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 CRLF2Q9HC73 371 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 MED29Q9NX70 200 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 NPAP1Q9NZP6 1156 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 B3GAT1Q9P2W7 334 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 ABCD2Q9UBJ2 740 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 TAGLN3Q9UI15 199 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 MAGEL2Q9UJ55 1249 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 RIMS3Q9UJD0 308 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 LAMP3Q9UQV4 416 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 FAM32AQ9Y421 112 aaKnown RBP8.18□□□□□ -1.1
MRPL55-216ENST00000366744 SLC25A15Q9Y619 301 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 C2CD3Q4AC94 2353 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 ACANP16112 2415 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 MTORP42345 2549 aa8.18□□□□□ -1.1
MRPL55-216ENST00000366744 ALPK2Q86TB3 2170 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 ZNF99A8MXY4 864 aaPredicted RBP8.17□□□□□ -1.1
MRPL55-216ENST00000366744 LRRN3E7EW58 273 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 BLOC1S5-TXNDC5H3BN57 136 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 PLPP3O14495 311 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 UPK3AO75631 287 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 OR7A10O76100 309 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 FARS2O95363 451 aaKnown RBP8.17□□□□□ -1.1
MRPL55-216ENST00000366744 STAMBPO95630 424 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 FAM107AO95990 144 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 PLAUP00749 431 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 IGF2P01344 180 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 IGHG1P01857 330 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 CD99P14209 185 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 IFNGR1P15260 489 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 ITGA2P17301 1181 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 CD40P25942 277 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 LOXP28300 417 aaPredicted RBP8.17□□□□□ -1.1
MRPL55-216ENST00000366744 NTF4P34130 210 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 BIDP55957 195 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 CLRN1P58418 232 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 LGALS3BPQ08380 585 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 PIN1Q13526 163 aaPredicted RBP8.17□□□□□ -1.1
MRPL55-216ENST00000366744 CEACAM16Q2WEN9 425 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 SAMD4BQ5PRF9 694 aaKnown RBP8.17□□□□□ -1.1
MRPL55-216ENST00000366744 AGAP6Q5VW22 663 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 LINC00114Q6XXX2 140 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 WDR88Q6ZMY6 472 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 SLC35D2Q76EJ3 337 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 VTCN1Q7Z7D3 282 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 CCDC36Q8IYA8 594 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 PGAM4Q8N0Y7 254 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 TMEM123Q8N131 208 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 FBXL14Q8N1E6 418 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 CCDC197Q8NCU1 140 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 SMAP2Q8WU79 429 aaPredicted RBP8.17□□□□□ -1.1
MRPL55-216ENST00000366744 ZNF566Q969W8 418 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 MCUR1Q96AQ8 359 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 ZNF426Q9BUY5 554 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 C1QTNF6Q9BXI9 259 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 RSPO3Q9BXY4 272 aaPredicted RBP8.17□□□□□ -1.1
MRPL55-216ENST00000366744 GSX2Q9BZM3 304 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 GPR35Q9HC97 309 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 CISD1Q9NZ45 108 aaKnown RBP8.17□□□□□ -1.1
MRPL55-216ENST00000366744 FBXL3Q9UKT7 428 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 POFUT2Q9Y2G5 429 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 ATP23Q9Y6H3 246 aa8.17□□□□□ -1.1
MRPL55-216ENST00000366744 A0A096LPE4 126 aa8.16□□□□□ -1.1
MRPL55-216ENST00000366744 ARPC4-TTLL3A0A0A6YYG9 625 aa8.16□□□□□ -1.1
MRPL55-216ENST00000366744 A0A1W2PPZ6 126 aa8.16□□□□□ -1.1
MRPL55-216ENST00000366744 SLC35F4A4IF30 521 aa8.16□□□□□ -1.1
MRPL55-216ENST00000366744 DPRXA6NFQ7 191 aa8.16□□□□□ -1.1
MRPL55-216ENST00000366744 RPL36A-HNRNPH2H7BZ11 118 aa8.16□□□□□ -1.1
MRPL55-216ENST00000366744 ZNF432O94892 652 aa8.16□□□□□ -1.1
MRPL55-216ENST00000366744 RAB36O95755 333 aa8.16□□□□□ -1.1
MRPL55-216ENST00000366744 BCL10O95999 233 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms