RNA–Protein interactions for RNA: ENST00000366741.5

MRPL55-214, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-214ENST00000366741 ALKBH2Q6NS38 261 aa12.84□□□□□ -0.35
MRPL55-214ENST00000366741 ANKRD16Q6P6B7 361 aa12.84□□□□□ -0.35
MRPL55-214ENST00000366741 NHLRC1Q6VVB1 395 aa12.84□□□□□ -0.35
MRPL55-214ENST00000366741 SLC46A3Q7Z3Q1 461 aa12.84□□□□□ -0.35
MRPL55-214ENST00000366741 VTCN1Q7Z7D3 282 aa12.84□□□□□ -0.35
MRPL55-214ENST00000366741 NKAIN4Q8IVV8 208 aa12.84□□□□□ -0.35
MRPL55-214ENST00000366741 FAM169BQ8N8A8 192 aa12.84□□□□□ -0.35
MRPL55-214ENST00000366741 OR1K1Q8NGR3 316 aa12.84□□□□□ -0.35
MRPL55-214ENST00000366741 OR52N5Q8NH56 324 aa12.84□□□□□ -0.35
MRPL55-214ENST00000366741 OR6X1Q8NH79 312 aa12.84□□□□□ -0.35
MRPL55-214ENST00000366741 TMEM255BQ8WV15 326 aa12.84□□□□□ -0.35
MRPL55-214ENST00000366741 CCL19Q99731 98 aa12.84□□□□□ -0.35
MRPL55-214ENST00000366741 DCAF13Q9NV06 445 aaKnown RBP12.84□□□□□ -0.35
MRPL55-214ENST00000366741 ARL8BQ9NVJ2 186 aa12.84□□□□□ -0.35
MRPL55-214ENST00000366741 ENPP4Q9Y6X5 453 aa12.84□□□□□ -0.35
MRPL55-214ENST00000366741 CSMD1Q96PZ7 3565 aa12.84□□□□□ -0.35
MRPL55-214ENST00000366741 DPRXA6NFQ7 191 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 LRRN3E7EW58 273 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 KPNA4O00629 521 aaPredicted RBP12.83□□□□□ -0.36
MRPL55-214ENST00000366741 RNF13O43567 381 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 ITGA2P17301 1181 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 FUT1P19526 365 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 CALB2P22676 271 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 UGT2B15P54855 530 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 FOXG1P55316 489 aaPredicted RBP12.83□□□□□ -0.36
MRPL55-214ENST00000366741 UBE2NP61088 152 aaKnown RBP12.83□□□□□ -0.36
MRPL55-214ENST00000366741 MXRA7P84157 204 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 TBRG1Q3YBR2 411 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 ZNF627Q7L945 461 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 LURAP1LQ8IV03 231 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 C20orf196Q8IYI0 205 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 DEPDC4Q8N2C3 294 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 FITM2Q8N6M3 262 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 WDR31Q8NA23 367 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 ACOT11Q8WXI4 607 aaPredicted RBP12.83□□□□□ -0.36
MRPL55-214ENST00000366741 AKAP1Q92667 903 aaKnown RBP eCLIP12.83□□□□□ -0.36
MRPL55-214ENST00000366741 POP5Q969H6 163 aaKnown RBP12.83□□□□□ -0.36
MRPL55-214ENST00000366741 FBXW5Q969U6 566 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 FAIMQ9NVQ4 179 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 TAS2R5Q9NYW4 299 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 NPAP1Q9NZP6 1156 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 GMPR2Q9P2T1 348 aaKnown RBP12.83□□□□□ -0.36
MRPL55-214ENST00000366741 CD300AQ9UGN4 299 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 EGFL7Q9UHF1 273 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 ADAM21Q9UKJ8 722 aa12.83□□□□□ -0.36
MRPL55-214ENST00000366741 FAM32AQ9Y421 112 aaKnown RBP12.83□□□□□ -0.36
MRPL55-214ENST00000366741 SLC35F4A4IF30 521 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 ZNF99A8MXY4 864 aaPredicted RBP12.82□□□□□ -0.36
MRPL55-214ENST00000366741 CLOCKO15516 846 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 SMPD2O60906 423 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 TSPAN19P0C672 248 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 NR2C1P13056 603 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 HLA-DOBP13765 273 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 PAX1P15863 534 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 RHCEP18577 417 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 PTNP21246 168 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 CD40P25942 277 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 DAP3P51398 398 aaKnown RBP12.82□□□□□ -0.36
MRPL55-214ENST00000366741 TAF11Q15544 211 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 ZNF672Q499Z4 452 aaPredicted RBP12.82□□□□□ -0.36
MRPL55-214ENST00000366741 C9orf135Q5VTT2 229 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 SHEQ5VZ18 495 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 SLC35D2Q76EJ3 337 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 DEFB107AQ8IZN7 70 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 OR6N1Q8NGY5 312 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 TMEM171Q8WVE6 324 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 BCL2L2Q92843 193 aaPredicted RBP12.82□□□□□ -0.36
MRPL55-214ENST00000366741 SLC25A44Q96H78 314 aaPredicted RBP12.82□□□□□ -0.36
MRPL55-214ENST00000366741 NSL1Q96IY1 281 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 CDRT15Q96T59 188 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 GRIP2Q9C0E4 1043 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 MUC13Q9H3R2 512 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 CXorf56Q9H5V9 222 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 CRLF2Q9HC73 371 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 GPR35Q9HC97 309 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 MED29Q9NX70 200 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 SNX13Q9Y5W8 968 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 TACC2O95359 2948 aa12.82□□□□□ -0.36
MRPL55-214ENST00000366741 A0A1W2PRG6 482 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 A0A1W2PRQ8 180 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 C11orf98E9PRG8 122 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 ABCD4O14678 606 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 ARHGEF9O43307 516 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 MGRN1O60291 552 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 PRSS23O95084 383 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 BCL10O95999 233 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 IFNGR1P15260 489 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 NCK1P16333 377 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 CSNK1A1P48729 337 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 SLC9A3P48764 834 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 SLC25A3Q00325 362 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 DGCR6Q14129 220 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 CEACAM16Q2WEN9 425 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 MTX3Q5HYI7 312 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 PRSS57Q6UWY2 283 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 LINGO2Q7L985 606 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 LSRQ86X29 649 aaPredicted RBP12.81□□□□□ -0.36
MRPL55-214ENST00000366741 CDK20Q8IZL9 346 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 FAM156AQ8NDB6 213 aa12.81□□□□□ -0.36
MRPL55-214ENST00000366741 PFN4Q8NHR9 129 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms