RNA–Protein interactions for RNA: ENST00000362402.1

RNU6-349P-201, Transcript of RNA, U6 small nuclear 349, pseudogene, humanhuman

BASIC

Gene RNU6-349P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-349P-201ENST00000362402 COL22A1Q8NFW1 1626 aaPredicted RBP0.19□□□□□ -2.38
RNU6-349P-201ENST00000362402 WDFY3Q8IZQ1 3526 aa0.19□□□□□ -2.38
RNU6-349P-201ENST00000362402 FHOD3Q2V2M9 1422 aa0.19□□□□□ -2.38
RNU6-349P-201ENST00000362402 FLG2Q5D862 2391 aaPredicted RBP0.19□□□□□ -2.38
RNU6-349P-201ENST00000362402 KIF27Q86VH2 1401 aa0.19□□□□□ -2.38
RNU6-349P-201ENST00000362402 PTPRUQ92729 1446 aa0.19□□□□□ -2.38
RNU6-349P-201ENST00000362402 ADGRL3Q9HAR2 1447 aa0.19□□□□□ -2.38
RNU6-349P-201ENST00000362402 SEC16AO15027 2179 aa0.19□□□□□ -2.38
RNU6-349P-201ENST00000362402 ADCY9O60503 1353 aa0.19□□□□□ -2.38
RNU6-349P-201ENST00000362402 CPDO75976 1380 aa0.19□□□□□ -2.38
RNU6-349P-201ENST00000362402 INSRP06213 1382 aa0.19□□□□□ -2.38
RNU6-349P-201ENST00000362402 CARMIL1Q5VZK9 1371 aa0.19□□□□□ -2.38
RNU6-349P-201ENST00000362402 CSMD1Q96PZ7 3565 aa0.19□□□□□ -2.38
RNU6-349P-201ENST00000362402 MAP3K5Q99683 1374 aa0.19□□□□□ -2.38
RNU6-349P-201ENST00000362402 PLEKHG2Q9H7P9 1386 aa0.19□□□□□ -2.38
RNU6-349P-201ENST00000362402 TNIKQ9UKE5 1360 aa0.19□□□□□ -2.38
RNU6-349P-201ENST00000362402 UNC13AQ9UPW8 1703 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 LRP1Q07954 4544 aaKnown RBP0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 MN1Q10571 1320 aaPredicted RBP0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 SH3TC1Q8TE82 1336 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 KIF16BQ96L93 1317 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 PHF3Q92576 2039 aaKnown RBP0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 UBR4Q5T4S7 5183 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 CUX2O14529 1486 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 ATP10AO60312 1499 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 DNAH14Q0VDD8 3507 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 C2orf16Q68DN1 1984 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 A0A075B6Q4 140 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 TRAV26-1A0A087WT03 109 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 KCNE1BA0A087WTH5 132 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 C15orf38-AP3S2A0A0A6YYH1 394 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 TRBV9A0A0B4J1U6 114 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 TRBV11-1A0A0K0K1C0 115 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 A0A0U1RRA0 63 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 KBTBD11-OT1A0A1B0GTJ5 212 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 LOC105371267A0A1B0GV96 52 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 C13orf42A0A1B0GVH6 325 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 SLC5A10A0PJK1 596 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 SMIM30A4D0T7 59 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 ARHGEF35A5YM69 484 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 HELTA6NFD8 242 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 ERICH4A6NGS2 130 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 FAM47DPA6NHR8 397 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 ARHGAP42A6NI28 874 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 OR6C65A6NJZ3 312 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 VSTM2BA6NLU5 285 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 OR2AG2A6NM03 316 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 LRRC30A6NM36 301 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 SNTNA6NMZ2 147 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 ZNF99A8MXY4 864 aaPredicted RBP0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 HSBP1L1C9JCN9 74 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 NPIPA2E9PIF3 369 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 SPECC1L-ADORA2AF8WAN1 911 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 H0YC42 278 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 H0YCG3 227 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 RNASEK-C17orf49H0YIS7 233 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 GOLGA8SH3BPF8 625 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 MKRN2OSH3BPM6 223 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 KLRC4-KLRK1H3BQV0 150 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 H3BQV1 296 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 K7EMT4 169 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 K7ENP7 123 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 K7EQM0 130 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 ZNF701M0R085 212 aaPredicted RBP0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 PSMD11O00231 422 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 WRBO00258 174 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 HIP1O00291 1037 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 CLDN5O00501 218 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 MPHOSPH10O00566 681 aaKnown RBP0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 SDHDO14521 159 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 GPR171O14626 319 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 PRRG1O14668 218 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 ITGB1BP1O14713 200 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 ZBTB5O15062 677 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 LSM1O15116 133 aaKnown RBP0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 ARPC3O15145 178 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 CETN3O15182 167 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 EIF3HO15372 352 aaKnown RBP eCLIP0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 TOX3O15405 576 aaPredicted RBP0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 CFLARO15519 480 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 RS1O15537 224 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 PLXNB1O43157 2135 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 ZSCAN12O43309 604 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 HCRTR1O43613 425 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 TRAPPC3O43617 180 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 NDUFA2O43678 99 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 BUB1O43683 1085 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 OR1F1O43749 312 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 DUX1O43812 170 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 SSX5O60225 188 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 GMFGO60234 142 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 NME2P1O60361 137 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 GMDSO60547 372 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 RAMP1O60894 148 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 RAMP3O60896 148 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 CDH16O75309 829 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 NIPSNAP2O75323 286 aa0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 BCAS1O75363 584 aaPredicted RBP0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 TRIM3O75382 744 aaPredicted RBP0.18□□□□□ -2.38
RNU6-349P-201ENST00000362402 ZNF189O75820 626 aaPredicted RBP0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms