RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 TNFSF12O43508 249 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 GPRIN2O60269 458 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 OR2J2O76002 312 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 KCNK2O95069 426 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 TP53P04637 393 aaPredicted RBP17.09■□□□□ 0.33
CLIP2-202ENST00000361545 NID1P14543 1247 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 S100A2P29034 98 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 BHLHE23Q8NDY6 225 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 FAM83FQ8NEG4 500 aaPredicted RBP17.09■□□□□ 0.33
CLIP2-202ENST00000361545 C16orf52Q8NHV5 167 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 DECR2Q9NUI1 292 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 A0A1W2PNR3 127 aa17.08■□□□□ 0.33
CLIP2-202ENST00000361545 ZNF780AO75290 641 aaPredicted RBP17.08■□□□□ 0.33
CLIP2-202ENST00000361545 OR6F1Q8NGZ6 308 aa17.08■□□□□ 0.33
CLIP2-202ENST00000361545 RAB39BQ96DA2 213 aa17.08■□□□□ 0.33
CLIP2-202ENST00000361545 UBQLN3Q9H347 655 aa17.08■□□□□ 0.33
CLIP2-202ENST00000361545 ACKR4Q9NPB9 350 aa17.08■□□□□ 0.33
CLIP2-202ENST00000361545 TRAPPC2LQ9UL33 140 aa17.08■□□□□ 0.33
CLIP2-202ENST00000361545 CD300LBA8K4G0 201 aa17.08■□□□□ 0.33
CLIP2-202ENST00000361545 PRRG2O14669 202 aa17.08■□□□□ 0.33
CLIP2-202ENST00000361545 BET1O15155 118 aa17.08■□□□□ 0.33
CLIP2-202ENST00000361545 SNAPC5O75971 98 aa17.08■□□□□ 0.33
CLIP2-202ENST00000361545 SLC2A1P11166 492 aa17.08■□□□□ 0.33
CLIP2-202ENST00000361545 PRKACBP22694 351 aa17.08■□□□□ 0.33
CLIP2-202ENST00000361545 MMP11P24347 488 aa17.08■□□□□ 0.33
CLIP2-202ENST00000361545 ZNF454Q8N9F8 522 aa17.08■□□□□ 0.33
CLIP2-202ENST00000361545 SLC25A43Q8WUT9 341 aaPredicted RBP17.08■□□□□ 0.33
CLIP2-202ENST00000361545 SC5DO75845 299 aa17.08■□□□□ 0.32
CLIP2-202ENST00000361545 GAAP10253 952 aa17.08■□□□□ 0.32
CLIP2-202ENST00000361545 APOBEC1P41238 236 aaKnown RBP17.08■□□□□ 0.32
CLIP2-202ENST00000361545 SULF2Q8IWU5 870 aa17.08■□□□□ 0.32
CLIP2-202ENST00000361545 NOX4Q9NPH5 578 aa17.08■□□□□ 0.32
CLIP2-202ENST00000361545 EHFQ9NZC4 300 aa17.08■□□□□ 0.32
CLIP2-202ENST00000361545 COA3Q9Y2R0 106 aaPredicted RBP17.08■□□□□ 0.32
CLIP2-202ENST00000361545 PRAMEF27A3QJZ7 478 aa17.08■□□□□ 0.32
CLIP2-202ENST00000361545 ARHGAP11BQ3KRB8 267 aa17.08■□□□□ 0.32
CLIP2-202ENST00000361545 DLEU7Q6UYE1 221 aa17.08■□□□□ 0.32
CLIP2-202ENST00000361545 DCXRQ7Z4W1 244 aa17.08■□□□□ 0.32
CLIP2-202ENST00000361545 SPIN2AQ99865 258 aa17.08■□□□□ 0.32
CLIP2-202ENST00000361545 SPIN2BQ9BPZ2 258 aa17.08■□□□□ 0.32
CLIP2-202ENST00000361545 CRISPLD2Q9H0B8 497 aa17.08■□□□□ 0.32
CLIP2-202ENST00000361545 UBQLN2Q9UHD9 624 aa17.08■□□□□ 0.32
CLIP2-202ENST00000361545 FCMRO60667 390 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 ICOSLGO75144 302 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 MT-ND4P03905 459 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 ARL3P36405 182 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 MPLP40238 635 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 RPS25P62851 125 aaKnown RBP17.07■□□□□ 0.32
CLIP2-202ENST00000361545 B4GALNT1Q00973 533 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 OLIG1Q8TAK6 271 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 SLC7A13Q8TCU3 470 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 CD40LGP29965 261 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 BDKRB2P30411 391 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 PPIAP62937 165 aaKnown RBP17.07■□□□□ 0.32
CLIP2-202ENST00000361545 PRTGQ2VWP7 1150 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 OR2T35Q8NGX2 323 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 IP6K3Q96PC2 410 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 CDX2Q99626 313 aaPredicted RBP17.07■□□□□ 0.32
CLIP2-202ENST00000361545 LANCL2Q9NS86 450 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 POMT2Q9UKY4 750 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 KLF13Q9Y2Y9 288 aaPredicted RBP17.07■□□□□ 0.32
CLIP2-202ENST00000361545 ZNF705EA8MWA4 302 aaPredicted RBP17.07■□□□□ 0.32
CLIP2-202ENST00000361545 ETHE1O95571 254 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 MT-ATP6P00846 226 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 SPRED1Q7Z699 444 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 OR5T1Q8NG75 326 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 LINC00615Q96LM1 132 aaPredicted RBP17.07■□□□□ 0.32
CLIP2-202ENST00000361545 HAO2Q9NYQ3 351 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 C4orf47A7E2U8 309 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 SELENOFO60613 162 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 WNT11O96014 354 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 SNRPBP14678 240 aaKnown RBP17.07■□□□□ 0.32
CLIP2-202ENST00000361545 PPICP45877 212 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 OR8B8Q15620 311 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 DHRS13Q6UX07 377 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 RPL3LQ92901 407 aaKnown RBP17.07■□□□□ 0.32
CLIP2-202ENST00000361545 PRRT1Q99946 306 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 SLC19A3Q9BZV2 496 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 OR11A1Q9GZK7 315 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 PIAS2O75928 621 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 BSGP35613 385 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 RUNX2Q13950 521 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 GIMAP5Q96F15 307 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 ASB4Q9Y574 426 aa17.07■□□□□ 0.32
CLIP2-202ENST00000361545 SLC34A2O95436 690 aa17.06■□□□□ 0.32
CLIP2-202ENST00000361545 CAMLGP49069 296 aa17.06■□□□□ 0.32
CLIP2-202ENST00000361545 TAS2R31P59538 309 aa17.06■□□□□ 0.32
CLIP2-202ENST00000361545 SLC10A1Q14973 349 aa17.06■□□□□ 0.32
CLIP2-202ENST00000361545 TMEM92Q6UXU6 159 aa17.06■□□□□ 0.32
CLIP2-202ENST00000361545 MAML2Q8IZL2 1156 aaPredicted RBP17.06■□□□□ 0.32
CLIP2-202ENST00000361545 DCUN1D4Q92564 292 aa17.06■□□□□ 0.32
CLIP2-202ENST00000361545 MVB12AQ96EY5 273 aa17.06■□□□□ 0.32
CLIP2-202ENST00000361545 LGI1O95970 557 aa17.06■□□□□ 0.32
CLIP2-202ENST00000361545 RPS18P62269 152 aaKnown RBP17.06■□□□□ 0.32
CLIP2-202ENST00000361545 PTRH1Q86Y79 214 aaKnown RBP17.06■□□□□ 0.32
CLIP2-202ENST00000361545 ENTHD1Q8IYW4 607 aa17.06■□□□□ 0.32
CLIP2-202ENST00000361545 MORN4Q8NDC4 146 aa17.06■□□□□ 0.32
CLIP2-202ENST00000361545 TMEM59Q9BXS4 323 aa17.06■□□□□ 0.32
CLIP2-202ENST00000361545 MCRIP1C9JLW8 97 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms