RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 SDHAF2Q9NX18 166 aa18.71■□□□□ 0.59
CDC42BPB-201ENST00000361246 MYOTQ9UBF9 498 aa18.71■□□□□ 0.59
CDC42BPB-201ENST00000361246 FBXO4Q9UKT5 387 aa18.71■□□□□ 0.59
CDC42BPB-201ENST00000361246 PPT2Q9UMR5 302 aa18.71■□□□□ 0.59
CDC42BPB-201ENST00000361246 PLAG1Q6DJT9 500 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 SGK3Q96BR1 496 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 NPFFR2Q9Y5X5 522 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 ADAMTSL3P82987 1691 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 A0A1W2PR80 420 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 SCAF4O95104 1147 aaKnown RBP18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 ITGB2P05107 769 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 IL10RAQ13651 578 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 RNLSQ5VYX0 342 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 NT5C3BQ969T7 300 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 TCEAL2Q9H3H9 227 aaPredicted RBP18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 LTB4R2Q9NPC1 389 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 PAQR5Q9NXK6 330 aaPredicted RBP18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 GHRLQ9UBU3 117 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 A0A1B0GWA3 101 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 H0Y8G0 127 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 KIR2DL3P43628 341 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 PLA1AQ53H76 456 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 CNOT9Q92600 299 aaKnown RBP18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 ZNF511Q8NB15 262 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 STEAP2Q8NFT2 490 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 PRR7Q8TB68 274 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 HAS2Q92819 552 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 MRPS28Q9Y2Q9 187 aaKnown RBP18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 PRKYO43930 277 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 KITLGP21583 273 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 SMN1Q16637 294 aaKnown RBP18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 SPATA46Q5T0L3 261 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 SUMF1Q8NBK3 374 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 KHSRPQ92945 711 aaKnown RBP eCLIP18.7■□□□□ 0.581e-8■■■□□ 15
CDC42BPB-201ENST00000361246 QPCTLQ9NXS2 382 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 H3BMQ9 156 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 DEGS1O15121 323 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 BAXQ07812 192 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 OR10X1Q8NGY0 326 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 DAZAP1Q96EP5 407 aaKnown RBP18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 TMEM45AQ9NWC5 275 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 EDARQ9UNE0 448 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 CACNG2Q9Y698 323 aa18.7■□□□□ 0.58
CDC42BPB-201ENST00000361246 GUSBP11Q6P575 273 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 GTPBP8Q8N3Z3 284 aaPredicted RBP18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 SLC16A11Q8NCK7 471 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 MYEOVQ96EZ4 313 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 NKX3-1Q99801 234 aaPredicted RBP18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 ICOSLGO75144 302 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 APOC3P02656 99 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 ALDH3B1P43353 468 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 METRNLQ641Q3 311 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 ENPP5Q9UJA9 477 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 ZNF225Q9UK10 706 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 CDHR4A6H8M9 788 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 CTNSO60931 367 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 SC5DO75845 299 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 HENMT1Q5T8I9 393 aaKnown RBP18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 TMEM207Q6UWW9 146 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 OR10K1Q8NGX5 313 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 PAQR8Q8TEZ7 354 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 SHISA8B8ZZ34 492 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 MALSU1Q96EH3 234 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 THAP7Q9BT49 309 aaPredicted RBP18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 WDR37Q9Y2I8 494 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 ZNF732B4DXR9 585 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 IFNA10P01566 189 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 EVI2BP34910 448 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 S100A12P80511 92 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 PHLDA2Q53GA4 152 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 CCBE1Q6UXH8 406 aaPredicted RBP18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 B3GNT8Q7Z7M8 397 aa18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 MYH14Q7Z406 1995 aaKnown RBP18.69■□□□□ 0.58
CDC42BPB-201ENST00000361246 HRO43593 1189 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 RFPL3O75679 317 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 RBMS3Q6XE24 437 aaKnown RBP18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 PLPP7Q8NBV4 271 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 CDX2Q99626 313 aaPredicted RBP18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 CENPBD1B2RD01 187 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 MYF6P23409 242 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 F2RP25116 425 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 C21orf33P30042 268 aaPredicted RBP18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 RAB15P59190 212 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 PDLIM3Q53GG5 364 aaPredicted RBP18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 B3GNT9Q6UX72 402 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 SLC29A1Q99808 456 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 BANF2Q9H503 90 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 FAM96BQ9Y3D0 163 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 LRIT2A6NDA9 550 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 SNRPBP14678 240 aaKnown RBP18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 SYT9Q86SS6 491 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 NPPBP16860 134 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 OR2T27Q8NH04 317 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 DVL3Q92997 716 aaPredicted RBP18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 H7C1Q1 480 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 HOXC11O43248 304 aaPredicted RBP18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 ADAM23O75077 832 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 OR11A1Q9GZK7 315 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 EGLN1Q9GZT9 426 aa18.68■□□□□ 0.58
CDC42BPB-201ENST00000361246 ZNF281Q9Y2X9 895 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms