RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SAGP10523 405 aaPredicted RBP6.65□□□□□ -1.34
CLCN3-202ENST00000360642 SHC1P29353 583 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 RABIFP47224 123 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 LBX1P52954 281 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 CSTF1Q05048 431 aaKnown RBP6.65□□□□□ -1.34
CLCN3-202ENST00000360642 TRAM1Q15629 374 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 ZFP69Q49AA0 526 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 KLHL12Q53G59 568 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 TRIQKQ629K1 86 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 FCRLBQ6BAA4 426 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 RTL4Q6ZR62 310 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 UBE2J2Q8N2K1 259 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 OR10H4Q8NGA5 316 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 OR4N2Q8NGD1 307 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 OR51A7Q8NH64 312 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 OR4C6Q8NH72 309 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 RPLP0P6Q8NHW5 317 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 ENKURQ8TC29 256 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 ART5Q96L15 291 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 TNFRSF13CQ96RJ3 184 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 GSDMCQ9BYG8 508 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 TRPV5Q9NQA5 729 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 CYSLTR2Q9NS75 346 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 MALT1Q9UDY8 824 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 NUFIP1Q9UHK0 495 aaKnown RBP6.65□□□□□ -1.34
CLCN3-202ENST00000360642 FBXL4Q9UKA2 621 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 A0A0G2JK05 382 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 FAM90A18PA6NE21 464 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 FAM90A16PA6NEW6 464 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 FAM90A9PA6NNJ1 464 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 RIIAD1A6NNX1 92 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 CENPXA8MT69 81 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 A8MV72 311 aaPredicted RBP6.65□□□□□ -1.34
CLCN3-202ENST00000360642 FAM90A5PA8MXJ8 464 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 NPIPB9F8W1W9 429 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 LYRM1O43325 122 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 RDH16O75452 317 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 FAM90A15PP0C7V4 464 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 FAM90A14PP0C7W9 464 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 ZNF3P17036 446 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 E2F1Q01094 437 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 SRSF5Q13243 272 aaKnown RBP6.65□□□□□ -1.34
CLCN3-202ENST00000360642 CRMP1Q14194 572 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 QPRTQ15274 297 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 SF3A2Q15428 464 aaKnown RBP6.65□□□□□ -1.34
CLCN3-202ENST00000360642 ZNF141Q15928 474 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 CD300EQ496F6 205 aaPredicted RBP6.65□□□□□ -1.34
CLCN3-202ENST00000360642 DMKNQ6E0U4 476 aaPredicted RBP6.65□□□□□ -1.34
CLCN3-202ENST00000360642 TPRA1Q86W33 373 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 GRHL3Q8TE85 626 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 SMPDL3BQ92485 455 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 VSTM2LQ96N03 204 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 NEU1Q99519 415 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 MARVELD1Q9BSK0 173 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 TRIM2Q9C040 744 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 OR51V1Q9H2C8 321 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 FOLH1BQ9HBA9 442 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 CHRNA9Q9UGM1 479 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 TCRBV21S2A2A0A5A6 115 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 PRAMEF26H0Y7S4 382 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 PPP1R3DO95685 299 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 SEMA4FO95754 770 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 PRKAR1AP10644 381 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 ST6GAL1P15907 406 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 TCEA1P23193 301 aaKnown RBP6.65□□□□□ -1.35
CLCN3-202ENST00000360642 CAPZA2P47755 286 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 RFX3P48380 749 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 CLDN20P56880 219 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 OR12D2P58182 307 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 TAS2R43P59537 309 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 RPP30P78346 268 aaKnown RBP6.65□□□□□ -1.35
CLCN3-202ENST00000360642 IGLV3-21P80748 117 aaPredicted RBP6.65□□□□□ -1.35
CLCN3-202ENST00000360642 FHL3Q13643 280 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 FGFBP1Q14512 234 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 CDK10Q15131 360 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 IDNKQ5T6J7 187 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 OAFQ86UD1 273 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 GLCCI1Q86VQ1 547 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 LRRC28Q86X40 367 aaPredicted RBP6.65□□□□□ -1.35
CLCN3-202ENST00000360642 C17orf47Q8NEP4 570 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 OR9A4Q8NGU2 314 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 PERPQ96FX8 193 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 C4orf36Q96KX1 117 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 LRFN5Q96NI6 719 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 RANGRFQ9HD47 186 aaPredicted RBP6.65□□□□□ -1.35
CLCN3-202ENST00000360642 POMT2Q9UKY4 750 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 CLDN16Q9Y5I7 305 aa6.65□□□□□ -1.35
CLCN3-202ENST00000360642 SDK1Q7Z5N4 2213 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 SPTY2D1-AS1A0A0U1RR47 76 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 SHISA7A6NL88 538 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 HRKO00198 91 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 TK1P04183 234 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 MRPL3P09001 348 aaKnown RBP6.64□□□□□ -1.35
CLCN3-202ENST00000360642 TFPIP10646 304 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 FAM53BQ14153 422 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 TATDN3Q17R31 274 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 PRTGQ2VWP7 1150 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 ALG10BQ5I7T1 473 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 FAM27D1Q5T7N8 215 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 ARL9Q6T311 187 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms