RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CD80P33681 288 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 SUOXP51687 545 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 CLINT1Q14677 625 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 PDLIM3Q53GG5 364 aaPredicted RBP8.15□□□□□ -1.1
COL6A6-201ENST00000358511 DLEU7Q6UYE1 221 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 FAM58AQ8N1B3 248 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 TMEM156Q8N614 296 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 UBTD2Q8WUN7 234 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 DNAJA3Q96EY1 480 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 RNF208Q9H0X6 261 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 FAM227AF5H4B4 570 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 CLEC2LP0C7M8 214 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 WNT7BP56706 349 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 GRM7Q14831 915 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 RAB35Q15286 201 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 CNN3Q15417 329 aaKnown RBP8.15□□□□□ -1.1
COL6A6-201ENST00000358511 PRAMEF8Q5VWM4 474 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 PRAMEF7Q5VXH5 474 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 B3GLCTQ6Y288 498 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 WDR88Q6ZMY6 472 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 CCDC190Q86UF4 302 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 OR1S2Q8NGQ3 325 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 NAA11Q9BSU3 229 aaPredicted RBP8.15□□□□□ -1.1
COL6A6-201ENST00000358511 NCDNQ9UBB6 729 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 FTCDNL1E5RQL4 147 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 GPX5O75715 221 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 SOWAHCQ53LP3 525 aaPredicted RBP8.15□□□□□ -1.11
COL6A6-201ENST00000358511 TMEM31Q5JXX7 168 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 IER5LQ5T953 404 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 HEPHL1Q6MZM0 1159 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 KIAA0907Q7Z7F0 614 aaPredicted RBP8.15□□□□□ -1.11
COL6A6-201ENST00000358511 OR1J1Q8NGS3 322 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 OR13C2Q8NGS9 318 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 TANKQ92844 425 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 FAM3DQ96BQ1 224 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 TEX37Q96LM6 180 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 ZNF586Q9NXT0 402 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 TMEM88BA6NKF7 163 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 OR2T1O43869 369 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 SFRP5Q5T4F7 317 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 CCNJQ5T5M9 372 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 TMPRSS7Q7RTY8 843 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 BTLAQ7Z6A9 289 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 CBARPQ8N350 705 aaPredicted RBP8.15□□□□□ -1.11
COL6A6-201ENST00000358511 SFT2D1Q8WV19 159 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 ANKRD19PQ9H560 264 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 ATXN7L1Q9ULK2 861 aaPredicted RBP8.15□□□□□ -1.11
COL6A6-201ENST00000358511 SCN5AQ14524 2016 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 ANGPTL7O43827 346 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 PAPLNO95428 1278 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 KITLGP21583 273 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 ADRA1AP35348 466 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 GATMP50440 423 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 TMEM151BQ8IW70 566 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 OR4C5Q8NGB2 326 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 OR9K2Q8NGE7 335 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 RAB9BQ9NP90 201 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 SLC39A9Q9NUM3 307 aa8.15□□□□□ -1.11
COL6A6-201ENST00000358511 ARRDC5A6NEK1 342 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 THBS1P07996 1170 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 RPS18P62269 152 aaKnown RBP8.14□□□□□ -1.11
COL6A6-201ENST00000358511 SUMO1P63165 101 aaKnown RBP8.14□□□□□ -1.11
COL6A6-201ENST00000358511 SSBP1Q04837 148 aaKnown RBP8.14□□□□□ -1.11
COL6A6-201ENST00000358511 WBP2NLQ6ICG8 309 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 OTOP2Q7RTS6 562 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 TSSK2Q96PF2 358 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 UHRF2Q96PU4 802 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 CYB5R1Q9UHQ9 305 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 TMX2-CTNND1H3BSU7 103 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 THBS3P49746 956 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 LMAN2Q12907 356 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 UBE2FQ969M7 185 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 OR10A5Q9H207 317 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 OR10A2Q9H208 303 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 NHSQ6T4R5 1651 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 RGPD3A6NKT7 1758 aaPredicted RBP8.14□□□□□ -1.11
COL6A6-201ENST00000358511 RGPD4Q7Z3J3 1758 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 LGALS8O00214 317 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 SYT5O00445 386 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 KIR2DL3P43628 341 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 HSD17B11Q8NBQ5 300 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 OR1J2Q8NGS2 313 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 ASB11Q8WXH4 323 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 BRI3BPQ8WY22 251 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 SUCNR1Q9BXA5 334 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 HRASLS2Q9NWW9 162 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 SERTAD3Q9UJW9 196 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 ZFP92A6NM28 416 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 GJE1A6NN92 205 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 XKR7Q5GH72 579 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 KCNG3Q8TAE7 436 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 ANKRD9Q96BM1 317 aaPredicted RBP8.14□□□□□ -1.11
COL6A6-201ENST00000358511 OR2A14Q96R47 310 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 GHRLQ9UBU3 117 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 ZNF230Q9UIE0 474 aaPredicted RBP8.14□□□□□ -1.11
COL6A6-201ENST00000358511 BCL2L11O43521 198 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 SIGLEC6O43699 453 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 TOX4O94842 621 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 H2AFB1P0C5Y9 115 aa8.14□□□□□ -1.11
COL6A6-201ENST00000358511 FPR3P25089 353 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms