RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 GP6Q9HCN6 339 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 PAPOLBQ9NRJ5 636 aaKnown RBP13.21□□□□□ -0.3
CCNE1-202ENST00000357943 INIPQ9NRY2 104 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 IL20Q9NYY1 176 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 NOX1Q9Y5S8 564 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 DOCK7Q96N67 2140 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 ALPLP05186 524 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 PLA2G2AP14555 144 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 IFNGR1P15260 489 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 EDNRAP25101 427 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 RPL4P36578 427 aaKnown RBP13.2□□□□□ -0.3
CCNE1-202ENST00000357943 CLDN17P56750 224 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 CTXN1P60606 82 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 DAG1Q14118 895 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 MELKQ14680 651 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 SLC36A3Q495N2 470 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 CLEC12AQ5QGZ9 265 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 TMEM201Q5SNT2 666 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 ZBTB49Q6ZSB9 765 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.2□□□□□ -0.3
CCNE1-202ENST00000357943 CCDC71Q8IV32 467 aaPredicted RBP13.2□□□□□ -0.3
CCNE1-202ENST00000357943 ZFP3Q96NJ6 502 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 C9orf16Q9BUW7 83 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 EMC6Q9BV81 110 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 KATNB1Q9BVA0 655 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 C12orf49Q9H741 205 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 KRT84Q9NSB2 600 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 EMC3Q9P0I2 261 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 ERRFI1Q9UJM3 462 aaPredicted RBP13.2□□□□□ -0.3
CCNE1-202ENST00000357943 RNF6Q9Y252 685 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 NOSIPQ9Y314 301 aaKnown RBP13.2□□□□□ -0.3
CCNE1-202ENST00000357943 ADAM18Q9Y3Q7 739 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 CDH10Q9Y6N8 788 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 MYO7BQ6PIF6 2116 aa13.2□□□□□ -0.3
CCNE1-202ENST00000357943 PHF3Q92576 2039 aaKnown RBP13.2□□□□□ -0.3
CCNE1-202ENST00000357943 ARHGAP21Q5T5U3 1957 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 HSPB2A8KAH6 182 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 H3BN98 237 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 GPR171O14626 319 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 OSMP13725 252 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 IGFBP5P24593 272 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 CTSSP25774 331 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 SELENOPP49908 381 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 ERVK-25P63136 954 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 HSPB2Q16082 182 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 ACKR1Q16570 336 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 OGFRL1Q5TC84 451 aaPredicted RBP13.19□□□□□ -0.3
CCNE1-202ENST00000357943 SLC35D2Q76EJ3 337 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 CLDN22Q8N7P3 220 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 GPX7Q96SL4 187 aaPredicted RBP13.19□□□□□ -0.3
CCNE1-202ENST00000357943 NRIP3Q9NQ35 241 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 USE1Q9NZ43 259 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 ZNF346Q9UL40 294 aaKnown RBP13.19□□□□□ -0.3
CCNE1-202ENST00000357943 POFUT2Q9Y2G5 429 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 EMC9Q9Y3B6 208 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 HIVEP3Q5T1R4 2406 aa13.19□□□□□ -0.3
CCNE1-202ENST00000357943 A0A1W2PRG6 482 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 SLC35F4A4IF30 521 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 CRHP06850 196 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 CD14P08571 375 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 BMP5P22003 454 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 POU1F1P28069 291 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 ALDH3A2P51648 485 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 TOP3AQ13472 1001 aaPredicted RBP13.18□□□□□ -0.3
CCNE1-202ENST00000357943 TAF11Q15544 211 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 DPY19L2P2Q6ZN68 376 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 FAM122BQ7Z309 247 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 BTLAQ7Z6A9 289 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 LIX1LQ8IVB5 337 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 PARP8Q8N3A8 854 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 DNAJC9Q8WXX5 260 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 STARD4Q96DR4 205 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 TSPAN32Q96QS1 320 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 SFXN3Q9BWM7 321 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 POLDIP3Q9BY77 421 aaKnown RBP13.18□□□□□ -0.3
CCNE1-202ENST00000357943 ZNF629Q9UEG4 869 aaPredicted RBP13.18□□□□□ -0.3
CCNE1-202ENST00000357943 SLC5A6Q9Y289 635 aa13.18□□□□□ -0.3
CCNE1-202ENST00000357943 UBR5O95071 2799 aaPredicted RBP13.18□□□□□ -0.3
CCNE1-202ENST00000357943 BHLHE40O14503 412 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 MRPL33O75394 65 aaKnown RBP13.17□□□□□ -0.3
CCNE1-202ENST00000357943 ZNF432O94892 652 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 PPP1R3DO95685 299 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 BCL10O95999 233 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 EPHA2P29317 976 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 SLC6A6P31641 620 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 BIDP55957 195 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 RUNX1T1Q06455 604 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 RPL13AP3Q6NVV1 102 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 NIPAL3Q6P499 406 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 CASP12Q6UXS9 341 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 AAED1Q7RTV5 226 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 GALNT4Q8N4A0 578 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 OR52L1Q8NGH7 329 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 OR6K3Q8NGY3 331 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 TMEM45BQ96B21 275 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 IFT27Q9BW83 186 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 TSSK6Q9BXA6 273 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 TXNIPQ9H3M7 391 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 TBC1D23Q9NUY8 699 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 IER3IP1Q9Y5U9 82 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms