RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 RD3Q7Z3Z2 195 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 TMEFF1Q8IYR6 380 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 EXD3Q8N9H8 876 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 OR6N1Q8NGY5 312 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 OR10G6Q8NH81 332 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 CERS4Q9HA82 394 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 STEAP1Q9UHE8 339 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 DNAH14Q0VDD8 3507 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 TRBV5-7A0A0A0MS05 114 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 POM121BA6NF01 834 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 SERINC4A6NH21 518 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 TMEM212A6NML5 194 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 GRXCR1A8MXD5 290 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 AQP8O94778 261 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 CSTAP01040 98 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 CD14P08571 375 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 NMBP08949 121 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 CTRB1P17538 263 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 KIR2DL1P43626 348 aaPredicted RBP16.14■□□□□ 0.17
RTN4-204ENST00000357732 LTBQ06643 244 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 EGR3Q06889 387 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 HLXQ14774 488 aaPredicted RBP16.14■□□□□ 0.17
RTN4-204ENST00000357732 CTRB2Q6GPI1 263 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 EIF4E3Q8N5X7 224 aaKnown RBP16.14■□□□□ 0.17
RTN4-204ENST00000357732 CCL4L1Q8NHW4 92 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 HERVK_113Q902F9 699 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 CCDC74AQ96AQ1 378 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 C3orf49Q96BT1 292 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 RASD2Q96D21 266 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 COMMD4Q9H0A8 199 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 CCDC86Q9H6F5 360 aaKnown RBP16.14■□□□□ 0.17
RTN4-204ENST00000357732 SLC17A5Q9NRA2 495 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 KIAA0100Q14667 2235 aaKnown RBP16.14■□□□□ 0.17
RTN4-204ENST00000357732 ANXA2P2A6NMY6 339 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 TTLL8A6PVC2 850 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 A8MXK9 166 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 PHYHO14832 338 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 PRAMEF2O60811 474 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 ABHD16AO95870 558 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 HRGP04196 525 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 ANXA2P07355 339 aaKnown RBP16.14■□□□□ 0.17
RTN4-204ENST00000357732 SDHAP31040 664 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 CLDN12P56749 244 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 ERVK-25P63136 954 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 TOMM20Q15388 145 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 LIPNQ5VXI9 398 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 OR5M10Q6IEU7 315 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 ANKRD16Q6P6B7 361 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 FAM122BQ7Z309 247 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 GABRG3Q99928 467 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 CDCP1Q9H5V8 836 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 TMEM14AQ9Y6G1 99 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 REV3LO60673 3130 aa16.14■□□□□ 0.17
RTN4-204ENST00000357732 MELTFP08582 738 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 ADRA2CP18825 462 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 RASGEF1BQ0VAM2 473 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.13■□□□□ 0.17
RTN4-204ENST00000357732 HSD17B13Q7Z5P4 300 aaPredicted RBP16.13■□□□□ 0.17
RTN4-204ENST00000357732 KRT77Q7Z794 578 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 CDC20BQ86Y33 519 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 RIT1Q92963 219 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 TOE1Q96GM8 510 aaKnown RBP16.13■□□□□ 0.17
RTN4-204ENST00000357732 SHARPINQ9H0F6 387 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 ALX4Q9H161 411 aaPredicted RBP16.13■□□□□ 0.17
RTN4-204ENST00000357732 TSPAN10Q9H1Z9 355 aaPredicted RBP16.13■□□□□ 0.17
RTN4-204ENST00000357732 FRRS1LQ9P0K9 344 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 MRM2Q9UI43 246 aaKnown RBP16.13■□□□□ 0.17
RTN4-204ENST00000357732 IDSB3KWA1 339 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 PYCARD-AS1I3L0S3 204 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 CA3P07451 260 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 GABRA1P14867 456 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 CSRP1P21291 193 aaKnown RBP16.13■□□□□ 0.17
RTN4-204ENST00000357732 ADH7P40394 386 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 SKP1P63208 163 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 FAM53BQ14153 422 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 ITPRIPL2Q3MIP1 535 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 DGAT2L6Q6ZPD8 337 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 TMUB2Q71RG4 321 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 TMPRSS12Q86WS5 348 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 ZPLD1Q8TCW7 415 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 GPR148Q8TDV2 347 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 ADAMTS18Q8TE60 1221 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 PCNPQ8WW12 178 aaKnown RBP16.13■□□□□ 0.17
RTN4-204ENST00000357732 ORAI1Q96D31 301 aa16.13■□□□□ 0.17
RTN4-204ENST00000357732 ADAD1Q96M93 576 aaKnown RBP16.13■□□□□ 0.17
RTN4-204ENST00000357732 A0A1B0GW55 424 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 FOXS1O43638 330 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 DUX4L2P0CJ85 424 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 DUX4L3P0CJ86 424 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 DUX4L4P0CJ87 422 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 DUX4L5P0CJ88 424 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 DUX4L6P0CJ89 424 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 DUX4L7P0CJ90 424 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 ITPKBP27987 946 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 NTSR1P30989 418 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 GDI1P31150 447 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 CDKN2AP42771 156 aaKnown RBP16.12■□□□□ 0.17
RTN4-204ENST00000357732 IGLV3-21P80748 117 aaPredicted RBP16.12■□□□□ 0.17
RTN4-204ENST00000357732 PCGF3Q3KNV8 242 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 PXDC1Q5TGL8 231 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms