RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 PACRGLQ8N7B6 248 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 ANKK1Q8NFD2 765 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 IFT27Q9BW83 186 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 NRIP3Q9NQ35 241 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 KLHL9Q9P2J3 617 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 IER3IP1Q9Y5U9 82 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 HOXD4P09016 255 aaPredicted RBP22.55■■□□□ 1.2
SSBP3-202ENST00000357475 SLC6A6P31641 620 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 AQP4P55087 323 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 CLDN17P56750 224 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 RUNX1T1Q06455 604 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 RNPS1Q15287 305 aaKnown RBP22.55■■□□□ 1.2
SSBP3-202ENST00000357475 SF3B4Q15427 424 aaKnown RBP eCLIP22.55■■□□□ 1.21e-6■■■■■ 27.4
SSBP3-202ENST00000357475 GUSBP1Q15486 140 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 ACSM5Q6NUN0 579 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 SLC35D2Q76EJ3 337 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 FAM122BQ7Z309 247 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 TEX47Q8TBZ9 253 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 RASD2Q96D21 266 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 Q96M85 177 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 ZNF570Q96NI8 536 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 DMRTA2Q96SC8 542 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 TM9SF2Q99805 663 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 POLDIP3Q9BY77 421 aaKnown RBP22.55■■□□□ 1.2
SSBP3-202ENST00000357475 BCO1Q9HAY6 547 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 ZNF346Q9UL40 294 aaKnown RBP22.55■■□□□ 1.2
SSBP3-202ENST00000357475 MEMO1Q9Y316 297 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 NOX1Q9Y5S8 564 aa22.55■■□□□ 1.2
SSBP3-202ENST00000357475 MYO7BQ6PIF6 2116 aa22.54■■□□□ 1.2
SSBP3-202ENST00000357475 CD14P08571 375 aa22.54■■□□□ 1.2
SSBP3-202ENST00000357475 AGTR1P30556 359 aa22.54■■□□□ 1.2
SSBP3-202ENST00000357475 NPRL3Q12980 569 aa22.54■■□□□ 1.2
SSBP3-202ENST00000357475 GINS1Q14691 196 aa22.54■■□□□ 1.2
SSBP3-202ENST00000357475 PDK3Q15120 406 aa22.54■■□□□ 1.2
SSBP3-202ENST00000357475 PTGES3Q15185 160 aaKnown RBP22.54■■□□□ 1.2
SSBP3-202ENST00000357475 SNCBQ16143 134 aa22.54■■□□□ 1.2
SSBP3-202ENST00000357475 DPY19L2P2Q6ZN68 376 aa22.54■■□□□ 1.2
SSBP3-202ENST00000357475 NUFIP2Q7Z417 695 aaKnown RBP22.54■■□□□ 1.2
SSBP3-202ENST00000357475 MCEMP1Q8IX19 187 aa22.54■■□□□ 1.2
SSBP3-202ENST00000357475 OR52L1Q8NGH7 329 aa22.54■■□□□ 1.2
SSBP3-202ENST00000357475 PRR7Q8TB68 274 aa22.54■■□□□ 1.2
SSBP3-202ENST00000357475 SMPD3Q9NY59 655 aaPredicted RBP22.54■■□□□ 1.2
SSBP3-202ENST00000357475 ORC6Q9Y5N6 252 aa22.54■■□□□ 1.2
SSBP3-202ENST00000357475 FREM1Q5H8C1 2179 aa22.54■■□□□ 1.2
SSBP3-202ENST00000357475 INTS1Q8N201 2190 aaKnown RBP22.54■■□□□ 1.2
SSBP3-202ENST00000357475 SS18L1O75177 396 aaPredicted RBP22.53■■□□□ 1.2
SSBP3-202ENST00000357475 CASP6P55212 293 aa22.53■■□□□ 1.2
SSBP3-202ENST00000357475 ESRRGP62508 458 aa22.53■■□□□ 1.2
SSBP3-202ENST00000357475 SIRPAP78324 504 aa22.53■■□□□ 1.2
SSBP3-202ENST00000357475 CDK5Q00535 292 aa22.53■■□□□ 1.2
SSBP3-202ENST00000357475 DBPQ10586 325 aaPredicted RBP22.53■■□□□ 1.2
SSBP3-202ENST00000357475 SLC35F1Q5T1Q4 408 aa22.53■■□□□ 1.2
SSBP3-202ENST00000357475 RPL13AP3Q6NVV1 102 aa22.53■■□□□ 1.2
SSBP3-202ENST00000357475 ASB10Q8WXI3 467 aa22.53■■□□□ 1.2
SSBP3-202ENST00000357475 ERMAPQ96PL5 475 aaPredicted RBP22.53■■□□□ 1.2
SSBP3-202ENST00000357475 TEX13CA0A0J9YWL9 993 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 A0A1W2PRG6 482 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 E9PLN8 166 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 CCL21O00585 134 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 IMPA2O14732 288 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 IGHMP01871 453 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 YES1P07947 543 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 CEACAM8P31997 349 aaPredicted RBP22.52■■□□□ 1.2
SSBP3-202ENST00000357475 TIMP3P35625 211 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 GIPRP48546 466 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 SELENOPP49908 381 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 RAD23AP54725 363 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 BIDP55957 195 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 PGGHGQ32M88 737 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 ARMC4Q5T2S8 1044 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 VWA1Q6PCB0 445 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 GMPPAQ96IJ6 420 aaPredicted RBP22.52■■□□□ 1.2
SSBP3-202ENST00000357475 VKORC1Q9BQB6 163 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 TXNIPQ9H3M7 391 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 C8orf4Q9NR00 106 aa22.52■■□□□ 1.2
SSBP3-202ENST00000357475 A0A0G2JNJ9 132 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 ZAR1LA6NP61 321 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 ZNF724A8MTY0 619 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 E9PQ18 207 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 M0R129 80 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 SLC2A10O95528 541 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 KIR2DL2P43627 348 aaPredicted RBP22.52■■□□□ 1.19
SSBP3-202ENST00000357475 RPL27P61353 136 aaKnown RBP22.52■■□□□ 1.19
SSBP3-202ENST00000357475 LGALS3BPQ08380 585 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 MESTQ5EB52 335 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 GTF2IRD2BQ6EKJ0 949 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 SLC27A4Q6P1M0 643 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 GTF2IRD2Q86UP8 949 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 FJX1Q86VR8 437 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 OR2T33Q8NG76 320 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 ZNF519Q8TB69 540 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 GRIP2Q9C0E4 1043 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 C12orf49Q9H741 205 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 Q9UFV3 132 aa22.52■■□□□ 1.19
SSBP3-202ENST00000357475 SLC35F4A4IF30 521 aa22.51■■□□□ 1.19
SSBP3-202ENST00000357475 TNFSF13O75888 250 aa22.51■■□□□ 1.19
SSBP3-202ENST00000357475 BCL10O95999 233 aa22.51■■□□□ 1.19
SSBP3-202ENST00000357475 TMIGD3P0DMS9 266 aaPredicted RBP22.51■■□□□ 1.19
SSBP3-202ENST00000357475 PER3P56645 1201 aa22.51■■□□□ 1.19
SSBP3-202ENST00000357475 IZUMO2Q6UXV1 221 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms