RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 SRPXP78539 464 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 MAP4K2Q12851 820 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 SLC35D3Q5M8T2 416 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 LYPD8Q6UX82 237 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 NAXDQ8IW45 347 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 LILRA2Q8N149 483 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 NKAIN3Q8N8D7 197 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 TMEM102Q8N9M5 508 aaPredicted RBP10.4□□□□□ -0.74
FN1-204ENST00000356005 C12orf43Q96C57 262 aaKnown RBP10.4□□□□□ -0.74
FN1-204ENST00000356005 LHPPQ9H008 270 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 BCAS1O75363 584 aaPredicted RBP10.4□□□□□ -0.74
FN1-204ENST00000356005 CBR3O75828 277 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 OR7C1O76099 320 aaPredicted RBP10.4□□□□□ -0.74
FN1-204ENST00000356005 UBE2UQ5VVX9 321 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 CAMKMTQ7Z624 323 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 ZDHHC16Q969W1 377 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 TM4SF18Q96CE8 201 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 ELP4Q96EB1 424 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 TEX101Q9BY14 249 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 EIF5A2Q9GZV4 153 aaKnown RBP10.4□□□□□ -0.74
FN1-204ENST00000356005 CHST11Q9NPF2 352 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 F5H0A9 414 aaPredicted RBP10.4□□□□□ -0.74
FN1-204ENST00000356005 FANCGO15287 622 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 IL1AP01583 271 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 CD14P08571 375 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 LRRC37A5PQ49AS3 106 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 SGK3Q96BR1 496 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 HDGFL3Q9Y3E1 203 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 CACNA1DQ01668 2161 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 M0R233 179 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 IFNA10P01566 189 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 F13BP05160 661 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 GABRG2P18507 467 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 GPX3P22352 226 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 TEAD1P28347 426 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 DTWD1Q8N5C7 304 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 HAS2Q92819 552 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 KISS1RQ969F8 398 aaPredicted RBP10.4□□□□□ -0.74
FN1-204ENST00000356005 KCNJ15Q99712 375 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 KIF25Q9UIL4 384 aa10.4□□□□□ -0.74
FN1-204ENST00000356005 HOXC4P09017 264 aaPredicted RBP10.4□□□□□ -0.75
FN1-204ENST00000356005 ITGAMP11215 1152 aa10.4□□□□□ -0.75
FN1-204ENST00000356005 TMEM64Q6YI46 380 aa10.4□□□□□ -0.75
FN1-204ENST00000356005 Q6ZNB5 142 aa10.4□□□□□ -0.75
FN1-204ENST00000356005 KHSRPQ92945 711 aaKnown RBP eCLIP10.4□□□□□ -0.752e-10■■■□□ 15.6
FN1-204ENST00000356005 GPR87Q9BY21 358 aa10.4□□□□□ -0.75
FN1-204ENST00000356005 SLC17A4Q9Y2C5 497 aa10.4□□□□□ -0.75
FN1-204ENST00000356005 K7ESM1 405 aa10.4□□□□□ -0.75
FN1-204ENST00000356005 DOK2O60496 412 aa10.4□□□□□ -0.75
FN1-204ENST00000356005 KNG1P01042 644 aa10.4□□□□□ -0.75
FN1-204ENST00000356005 SNCAP37840 140 aa10.4□□□□□ -0.75
FN1-204ENST00000356005 ID4P47928 161 aa10.4□□□□□ -0.75
FN1-204ENST00000356005 SEC61A1P61619 476 aaKnown RBP10.4□□□□□ -0.75
FN1-204ENST00000356005 DEFA5Q01523 94 aa10.4□□□□□ -0.75
FN1-204ENST00000356005 SLC16A9Q7RTY1 509 aa10.4□□□□□ -0.75
FN1-204ENST00000356005 OR52H1Q8NGJ2 320 aa10.4□□□□□ -0.75
FN1-204ENST00000356005 TOMM40LQ969M1 308 aa10.4□□□□□ -0.75
FN1-204ENST00000356005 FAM173AQ9BQD7 235 aa10.4□□□□□ -0.75
FN1-204ENST00000356005 LIN7BQ9HAP6 207 aa10.4□□□□□ -0.75
FN1-204ENST00000356005 WSB2Q9NYS7 404 aaPredicted RBP10.4□□□□□ -0.75
FN1-204ENST00000356005 A0A087WV62 115 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 SMIM30A4D0T7 59 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 SLC22A20A6NK97 555 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 CEBPZOSA8MTT3 80 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 A8MXE2 369 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 H0Y8X5 98 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 MT-CO3P00414 261 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 BMP2P12643 396 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 SSTR4P31391 388 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 HES5Q5TA89 166 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 C1orf140Q5VVS0 124 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 PRAMEF9Q5VWM5 478 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 DPPA2Q7Z7J5 298 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 GDPD1Q8N9F7 314 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 RGCCQ9H4X1 137 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 MOB1AQ9H8S9 216 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 A0A0U1RQS6 177 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 A6NHS1 94 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 G3V3Y1 287 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 SCAF4O95104 1147 aaKnown RBP10.39□□□□□ -0.75
FN1-204ENST00000356005 RAB3DO95716 219 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 NPPBP16860 134 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 KITLGP21583 273 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 SUB1P53999 127 aaKnown RBP eCLIP10.39□□□□□ -0.75
FN1-204ENST00000356005 PFN3P60673 137 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 RNPS1Q15287 305 aaKnown RBP10.39□□□□□ -0.75
FN1-204ENST00000356005 PDLIM3Q53GG5 364 aaPredicted RBP10.39□□□□□ -0.75
FN1-204ENST00000356005 C18orf63Q68DL7 685 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 WDR5BQ86VZ2 330 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 PGBD5Q8N414 524 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 OR6T1Q8NGN1 323 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 FNDC9Q8TBE3 224 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 TTC9Q92623 222 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 TMEM38AQ9H6F2 299 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 SPTBN1Q01082 2364 aaKnown RBP10.39□□□□□ -0.75
FN1-204ENST00000356005 OR7A17O14581 309 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 ZNF718Q3SXZ3 478 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 TP53I3Q53FA7 332 aa10.39□□□□□ -0.75
FN1-204ENST00000356005 RPL22L1Q6P5R6 122 aaKnown RBP10.39□□□□□ -0.75
FN1-204ENST00000356005 FAM111BQ6SJ93 734 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms