RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 POU4F3Q15319 338 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 ZBTB37Q5TC79 503 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 UNQ9370/PRO34162Q6UXP9 181 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 STAC2Q6ZMT1 411 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 OR11G2Q8NGC1 345 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 SLC25A36Q96CQ1 311 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 S100A16Q96FQ6 103 aaKnown RBP17.8■□□□□ 0.44
COL13A1-201ENST00000354547 SLC38A3Q99624 504 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 COPZ2Q9P299 210 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 LAMP5Q9UJQ1 280 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 ITGA10O75578 1167 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 HLA-DQA2P01906 255 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 MST1P26927 711 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 TACR3P29371 465 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 P2RX3P56373 397 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 RPL18Q07020 188 aaKnown RBP17.8■□□□□ 0.44
COL13A1-201ENST00000354547 KIAA0895LQ68EN5 471 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 FCAMRQ8WWV6 532 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 TSLPQ969D9 159 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 RTN4RQ9BZR6 473 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 MSRAQ9UJ68 235 aa17.8■□□□□ 0.44
COL13A1-201ENST00000354547 IGHV5-51A0A0C4DH38 117 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 PDCD5O14737 125 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 KRT33AO76009 404 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 ZP1P60852 638 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 RPS4XP62701 263 aaKnown RBP17.79■□□□□ 0.44
COL13A1-201ENST00000354547 FUT7Q11130 342 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 SLC35D3Q5M8T2 416 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 TTLL10Q6ZVT0 673 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 OR6V1Q8N148 313 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 ZNF676Q8N7Q3 588 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 ZNF680Q8NEM1 530 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 RNF166Q96A37 237 aaPredicted RBP17.79■□□□□ 0.44
COL13A1-201ENST00000354547 MMP25Q9NPA2 562 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 UBQLN4Q9NRR5 601 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 MMP17Q9ULZ9 603 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 PROS1P07225 676 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 ADRA2CP18825 462 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 RAD52P43351 418 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 RPL6Q02878 288 aaKnown RBP17.79■□□□□ 0.44
COL13A1-201ENST00000354547 CAMK2BQ13554 666 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 LGALSLQ3ZCW2 172 aaPredicted RBP17.79■□□□□ 0.44
COL13A1-201ENST00000354547 TEX261Q6UWH6 196 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 ELMOD2Q8IZ81 293 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 LMX1AQ8TE12 382 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 GAL3ST1Q99999 423 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 DLL4Q9NR61 685 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 KLHL9Q9P2J3 617 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 U3KQ87 197 aa17.79■□□□□ 0.44
COL13A1-201ENST00000354547 CFAP54Q96N23 3096 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 HCRTR2O43614 444 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 SRPX2O60687 465 aaPredicted RBP17.78■□□□□ 0.44
COL13A1-201ENST00000354547 PEX14O75381 377 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 AKR7A3O95154 331 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 WISP1O95388 367 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 UTS2O95399 124 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 PSMB1P20618 241 aaKnown RBP17.78■□□□□ 0.44
COL13A1-201ENST00000354547 CD1CP29017 333 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 SKP1P63208 163 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 CAMK2DQ13557 499 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 TOMM34Q15785 309 aaPredicted RBP17.78■□□□□ 0.44
COL13A1-201ENST00000354547 SLC35D2Q76EJ3 337 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 ATG4DQ86TL0 474 aaPredicted RBP17.78■□□□□ 0.44
COL13A1-201ENST00000354547 CMIPQ8IY22 773 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 TRAV8-7A0A075B6U6 113 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 MEIS3P1A6NDR6 274 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 NSA2O95478 260 aaKnown RBP17.78■□□□□ 0.44
COL13A1-201ENST00000354547 TACSTD2P09758 323 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 ANXA7P20073 488 aaKnown RBP17.78■□□□□ 0.44
COL13A1-201ENST00000354547 ADH7P40394 386 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 ALKBH1Q13686 389 aaKnown RBP17.78■□□□□ 0.44
COL13A1-201ENST00000354547 PWWP2BQ6NUJ5 590 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 PM20D2Q8IYS1 436 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 SLC43A2Q8N370 569 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 FAM109AQ8N4B1 249 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 NSMAFQ92636 917 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 TAAR8Q969N4 342 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 MAP6Q96JE9 813 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 LRFN5Q96NI6 719 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 KCNK15Q9H427 330 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 TAS2R10Q9NYW0 307 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 DHCR7Q9UBM7 475 aaKnown RBP17.78■□□□□ 0.44
COL13A1-201ENST00000354547 UNC13CQ8NB66 2214 aa17.78■□□□□ 0.44
COL13A1-201ENST00000354547 LRP4O75096 1905 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 ANXA2P2A6NMY6 339 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 ZNF264O43296 627 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 SDC3O75056 442 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 ANXA2P07355 339 aaKnown RBP17.77■□□□□ 0.44
COL13A1-201ENST00000354547 SDHAP31040 664 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 PTH2RP49190 550 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 DYRK1AQ13627 763 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 MESTQ5EB52 335 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 SLC16A9Q7RTY1 509 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 FAM122BQ7Z309 247 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 ATOH1Q92858 354 aaPredicted RBP17.77■□□□□ 0.44
COL13A1-201ENST00000354547 GPR137Q96N19 417 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 TSPAN32Q96QS1 320 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 SLITRK2Q9H156 845 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 ZNF69Q9UC07 566 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 PPIEQ9UNP9 301 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms