RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 NUP210LQ5VU65 1888 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 IFITM5A6NNB3 132 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 PDCD5O14737 125 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 TCRBP04435 133 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 HIST1H2ABP04908 130 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 SLC6A8P48029 635 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 NR0B1P51843 470 aaKnown RBP19.78■□□□□ 0.76
SHMT1-202ENST00000352886 NXPH1P58417 271 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 UBXN2BQ14CS0 331 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 LIPNQ5VXI9 398 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 BAIAP2L2Q6UXY1 529 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 HIST3H2AQ7L7L0 130 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 CMTM4Q8IZR5 234 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 OR6V1Q8N148 313 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 C7orf57Q8NEG2 295 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 HIST1H2ACQ93077 130 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 ELF4Q99607 663 aaPredicted RBP19.78■□□□□ 0.76
SHMT1-202ENST00000352886 PHF7Q9BWX1 381 aaPredicted RBP19.78■□□□□ 0.76
SHMT1-202ENST00000352886 SCO2O43819 266 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 UPK3AO75631 287 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 GIFP27352 417 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 EMC4Q5J8M3 183 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 MARCH3Q86UD3 253 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 CADM4Q8NFZ8 388 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 OR2T4Q8NH00 348 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 AUNIPQ9H7T9 357 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 TCRBV16S1A1N1A0A5B0 115 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 AIPO00170 330 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 CSNK1EP49674 416 aaKnown RBP19.77■□□□□ 0.76
SHMT1-202ENST00000352886 NSDHLQ15738 373 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 HLA-DQA1Q5Y7H0 255 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 KCTD20Q7Z5Y7 419 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 CDC20BQ86Y33 519 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 BMPERQ8N8U9 685 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 ADAMTS14Q8WXS8 1223 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 MAP6Q96JE9 813 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 C12orf10Q9HB07 376 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 NUBP2Q9Y5Y2 271 aa19.77■□□□□ 0.76
SHMT1-202ENST00000352886 FER1L5A0AVI2 2057 aa19.77■□□□□ 0.75
SHMT1-202ENST00000352886 IGHV1OR21-1A0A087WYE8 117 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 ANKRD34BA5PLL1 514 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 KHNYNO15037 678 aaKnown RBP19.76■□□□□ 0.75
SHMT1-202ENST00000352886 NUDT14O95848 222 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 CXCR1P25024 350 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 CFHR1Q03591 330 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 TNK1Q13470 666 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 FAM199XQ6PEV8 388 aaPredicted RBP19.76■□□□□ 0.75
SHMT1-202ENST00000352886 OR6N2Q8NGY6 317 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 OR5AK2Q8NH90 309 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 FKRPQ9H9S5 495 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 FRRS1LQ9P0K9 344 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 SDK1Q7Z5N4 2213 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 ANKRD61A6NGH8 418 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 ITGA10O75578 1167 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 PIAS2O75928 621 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 FBLP22087 321 aaKnown RBP19.76■□□□□ 0.75
SHMT1-202ENST00000352886 RPS27P42677 84 aaKnown RBP19.76■□□□□ 0.75
SHMT1-202ENST00000352886 CLDN12P56749 244 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 DCAF7P61962 342 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 ALKBH1Q13686 389 aaKnown RBP19.76■□□□□ 0.75
SHMT1-202ENST00000352886 C1QL3Q5VWW1 255 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 SMIM4Q8WVI0 70 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 SCMH1Q96GD3 660 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 CMTM3Q96MX0 182 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 CACNG6Q9BXT2 260 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 MED28Q9H204 178 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 SYT4Q9H2B2 425 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 CHRDQ9H2X0 955 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 LIN7BQ9HAP6 207 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 ZNF304Q9HCX3 659 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 LAMP5Q9UJQ1 280 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 IKZF2Q9UKS7 526 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 V9GY05 133 aa19.76■□□□□ 0.75
SHMT1-202ENST00000352886 CTDSPLO15194 276 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 GSTZ1O43708 216 aaPredicted RBP19.75■□□□□ 0.75
SHMT1-202ENST00000352886 ABHD16AO95870 558 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 RENP00797 406 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 FOLR1P15328 257 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 PRKCAP17252 672 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 CCR6P51684 374 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 PLCXD2Q0VAA5 305 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 SMAD4Q13485 552 aaKnown RBP19.75■□□□□ 0.75
SHMT1-202ENST00000352886 FCN2Q15485 313 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 NUP54Q7Z3B4 507 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 GTPBP2Q9BX10 602 aaKnown RBP19.75■□□□□ 0.75
SHMT1-202ENST00000352886 WDR76Q9H967 626 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 C7orf66A4D0T2 115 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 TRABD2BA6NFA1 517 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 AKR7A3O95154 331 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 MT-ND4P03905 459 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 ANKRD34CP0C6C1 535 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 C1orf189Q5VU69 101 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 FAM205BPQ63HN1 556 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 DPY19L4Q7Z388 723 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 CEP76Q8TAP6 659 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 DAZLQ92904 295 aaKnown RBP19.75■□□□□ 0.75
SHMT1-202ENST00000352886 TBL1XR1Q9BZK7 514 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 GHITMQ9H3K2 345 aa19.75■□□□□ 0.75
SHMT1-202ENST00000352886 A0A1B0GTH9 108 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 ARHGEF9O43307 516 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms