RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 FAM205BPQ63HN1 556 aa20.09■□□□□ 0.81
UPF3A-201ENST00000351487 CARFQ8N187 725 aa20.09■□□□□ 0.81
UPF3A-201ENST00000351487 BMPERQ8N8U9 685 aa20.09■□□□□ 0.81
UPF3A-201ENST00000351487 TAAR8Q969N4 342 aa20.09■□□□□ 0.81
UPF3A-201ENST00000351487 ADAD1Q96M93 576 aaKnown RBP20.09■□□□□ 0.81
UPF3A-201ENST00000351487 AUNIPQ9H7T9 357 aa20.09■□□□□ 0.81
UPF3A-201ENST00000351487 LMAN1LQ9HAT1 526 aa20.09■□□□□ 0.81
UPF3A-201ENST00000351487 MRPL39Q9NYK5 338 aaKnown RBP20.09■□□□□ 0.81
UPF3A-201ENST00000351487 TRBV5-5A0A0J9YX44 114 aa20.08■□□□□ 0.81
UPF3A-201ENST00000351487 A0A1W2PQD3 144 aa20.08■□□□□ 0.81
UPF3A-201ENST00000351487 TCRBV16S1A1N1A0A5B0 115 aa20.08■□□□□ 0.81
UPF3A-201ENST00000351487 GDNFP39905 211 aa20.08■□□□□ 0.81
UPF3A-201ENST00000351487 BTBD16Q32M84 506 aa20.08■□□□□ 0.81
UPF3A-201ENST00000351487 BTN2A1Q7KYR7 527 aa20.08■□□□□ 0.81
UPF3A-201ENST00000351487 OR6V1Q8N148 313 aa20.08■□□□□ 0.81
UPF3A-201ENST00000351487 C7orf57Q8NEG2 295 aa20.08■□□□□ 0.81
UPF3A-201ENST00000351487 OR5AK2Q8NH90 309 aa20.08■□□□□ 0.81
UPF3A-201ENST00000351487 GAL3ST4Q96RP7 486 aa20.08■□□□□ 0.81
UPF3A-201ENST00000351487 NUDT9Q9BW91 350 aa20.08■□□□□ 0.81
UPF3A-201ENST00000351487 PCED1AQ9H1Q7 454 aa20.08■□□□□ 0.81
UPF3A-201ENST00000351487 EMC7Q9NPA0 242 aa20.08■□□□□ 0.81
UPF3A-201ENST00000351487 FRRS1LQ9P0K9 344 aa20.08■□□□□ 0.81
UPF3A-201ENST00000351487 RHPN2P1A8MT19 583 aa20.08■□□□□ 0.8
UPF3A-201ENST00000351487 TO15178 435 aa20.08■□□□□ 0.8
UPF3A-201ENST00000351487 ATXN8OSP0DMR3 200 aa20.08■□□□□ 0.8
UPF3A-201ENST00000351487 EEF1A1P5Q5VTE0 462 aa20.08■□□□□ 0.8
UPF3A-201ENST00000351487 PRSS45Q7RTY3 260 aa20.08■□□□□ 0.8
UPF3A-201ENST00000351487 PRR22Q8IZ63 422 aa20.08■□□□□ 0.8
UPF3A-201ENST00000351487 CADM4Q8NFZ8 388 aa20.08■□□□□ 0.8
UPF3A-201ENST00000351487 OR11H7Q8NGC8 314 aa20.08■□□□□ 0.8
UPF3A-201ENST00000351487 OR51J1Q9H342 316 aa20.08■□□□□ 0.8
UPF3A-201ENST00000351487 LIN7BQ9HAP6 207 aa20.08■□□□□ 0.8
UPF3A-201ENST00000351487 SRA1Q9HD15 236 aaKnown RBP20.08■□□□□ 0.8
UPF3A-201ENST00000351487 SEC16AO15027 2179 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.07■□□□□ 0.8
UPF3A-201ENST00000351487 CDC40O60508 579 aaKnown RBP eCLIP20.07■□□□□ 0.8
UPF3A-201ENST00000351487 RPP14O95059 124 aaKnown RBP20.07■□□□□ 0.8
UPF3A-201ENST00000351487 RENP00797 406 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 BGLAPP02818 100 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 HIST1H2ABP04908 130 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 ANKRD34CP0C6C1 535 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 CALCBP10092 127 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 POU3F3P20264 500 aaPredicted RBP20.07■□□□□ 0.8
UPF3A-201ENST00000351487 IL12BP29460 328 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 MAGEB1P43366 347 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 EFNA3P52797 238 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 HSD11B2P80365 405 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 SNTB2Q13425 540 aaKnown RBP20.07■□□□□ 0.8
UPF3A-201ENST00000351487 STAC2Q6ZMT1 411 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 HIST3H2AQ7L7L0 130 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 CDH24Q86UP0 819 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 C9orf40Q8IXQ3 194 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 IZUMO1Q8IYV9 350 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 ZNF433Q8N7K0 673 aaPredicted RBP20.07■□□□□ 0.8
UPF3A-201ENST00000351487 DEDD2Q8WXF8 326 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 HIST1H2ACQ93077 130 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 WDR76Q9H967 626 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 AKAP7Q9P0M2 348 aaPredicted RBP20.07■□□□□ 0.8
UPF3A-201ENST00000351487 DHCR7Q9UBM7 475 aaKnown RBP20.07■□□□□ 0.8
UPF3A-201ENST00000351487 TP53BP1Q12888 1972 aaPredicted RBP20.07■□□□□ 0.8
UPF3A-201ENST00000351487 A0A087WV48 116 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 HSPB2A8KAH6 182 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 ALG1L2C9J202 215 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 H7C1C5 153 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 HCRTR2O43614 444 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 TSPAN2O60636 221 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 CCR6P51684 374 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 RP1P56715 2156 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 NXPH1P58417 271 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 LCN6P62502 163 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 GALK2Q01415 458 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 EGR3Q06889 387 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 HSPB2Q16082 182 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 CREB3L2Q70SY1 520 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 EID2Q8N6I1 236 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 KLHL15Q96M94 604 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 STMN3Q9NZ72 180 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 LAMP5Q9UJQ1 280 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 RNF215Q9Y6U7 377 aa20.07■□□□□ 0.8
UPF3A-201ENST00000351487 GABARAPH6UMI1 98 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 FABP7O15540 132 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 EIF4E2O60573 245 aaKnown RBP20.06■□□□□ 0.8
UPF3A-201ENST00000351487 ALOX5APP20292 161 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 GSG1Q2KHT4 349 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 LINGO2Q7L985 606 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 OR56B4Q8NH76 319 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 PHF21AQ96BD5 680 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 ACTR6Q9GZN1 396 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 SLITRK2Q9H156 845 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 TCF7L1Q9HCS4 588 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 SLCO1C1Q9NYB5 712 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 TMEM14AQ9Y6G1 99 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 SULT1B1O43704 296 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 AKR7A3O95154 331 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 MT-ND4P03905 459 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 RAB40ALP0C0E4 278 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 H2AFB2P0C5Z0 115 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 FAM69AQ5T7M9 428 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 PWWP2BQ6NUJ5 590 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 FCRLAQ7L513 359 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms