RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 SETD6Q8TBK2 473 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 NR4A3Q92570 626 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 TMEM43Q9BTV4 400 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 ALG12Q9BV10 488 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 TSPAN10Q9H1Z9 355 aaPredicted RBP9.47□□□□□ -0.89
SMPD4-201ENST00000351288 AUNIPQ9H7T9 357 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 AKIRIN1Q9H9L7 192 aaPredicted RBP9.47□□□□□ -0.89
SMPD4-201ENST00000351288 RBFOX1Q9NWB1 397 aaKnown RBP9.47□□□□□ -0.89
SMPD4-201ENST00000351288 COPS3Q9UNS2 423 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 A0A087WV62 115 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 FLRT2O43155 660 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 PPM1BO75688 479 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 WISP1O95388 367 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 HOXC4P09017 264 aaPredicted RBP9.47□□□□□ -0.89
SMPD4-201ENST00000351288 SMIM10L1P0DMW3 83 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 FASLGP48023 281 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 ACY1Q03154 408 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 NR0B2Q15466 257 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 CEBPEQ15744 281 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 MEP1BQ16820 701 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 SFRP4Q6FHJ7 346 aaPredicted RBP9.47□□□□□ -0.89
SMPD4-201ENST00000351288 PWWP2BQ6NUJ5 590 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 MRGPREQ86SM8 312 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 ZNF524Q96C55 264 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 ZNF764Q96H86 408 aaPredicted RBP9.47□□□□□ -0.89
SMPD4-201ENST00000351288 SMIM10Q96HG1 83 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 MS4A3Q96HJ5 214 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 EXO5Q9H790 373 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 MCCC2Q9HCC0 563 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 CMC2Q9NRP2 79 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 MRPS18AQ9NVS2 196 aaKnown RBP9.47□□□□□ -0.89
SMPD4-201ENST00000351288 DNAJB12Q9NXW2 375 aaKnown RBP9.47□□□□□ -0.89
SMPD4-201ENST00000351288 DENND4AQ7Z401 1863 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 A0A1W2PNR3 127 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 RLN1P04808 185 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 ARSBP15848 533 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 SLC6A9P48067 706 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 ADAM8P78325 824 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 TLE3Q04726 772 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 PRAMEF8Q5VWM4 474 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 PRAMEF7Q5VXH5 474 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 MZT2BQ6NZ67 158 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 CD200R1LQ6Q8B3 271 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 TOR1AIP2Q8NFQ8 470 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 SCARF2Q96GP6 870 aaPredicted RBP9.47□□□□□ -0.89
SMPD4-201ENST00000351288 ERVMER34-1Q9H9K5 563 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 EXOGQ9Y2C4 368 aaKnown RBP9.47□□□□□ -0.89
SMPD4-201ENST00000351288 FREM3P0C091 2139 aa9.47□□□□□ -0.89
SMPD4-201ENST00000351288 SUSD5O60279 629 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 LYPD3O95274 346 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 ATF1P18846 271 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 F8A1P23610 371 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 GIFP27352 417 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 GALEQ14376 348 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 CDK10Q15131 360 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 HSD17B12Q53GQ0 312 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 MANEAQ5SRI9 462 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 ZNF613Q6PF04 617 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 CORO6Q6QEF8 472 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 CHST4Q8NCG5 386 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 NXPE2Q96DL1 559 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 OR2B2Q9GZK3 357 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 MED29Q9NX70 200 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 FLVCR2Q9UPI3 526 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 FZD7O75084 574 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 CCL4P13236 92 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 APEHP13798 732 aaKnown RBP9.46□□□□□ -0.89
SMPD4-201ENST00000351288 RFC3P40938 356 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 ACAA2P42765 397 aaKnown RBP9.46□□□□□ -0.89
SMPD4-201ENST00000351288 FCN2Q15485 313 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 ELAVL1Q15717 326 aaKnown RBP9.46□□□□□ -0.89
SMPD4-201ENST00000351288 INPP5JQ15735 1006 aaPredicted RBP9.46□□□□□ -0.89
SMPD4-201ENST00000351288 BCL2A1Q16548 175 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 OR6N1Q8NGY5 312 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 OR52N1Q8NH53 320 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 VSTM2LQ96N03 204 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 SLC46A1Q96NT5 459 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 PELOQ9BRX2 385 aaKnown RBP9.46□□□□□ -0.89
SMPD4-201ENST00000351288 CHIAQ9BZP6 476 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 B3GNT4Q9C0J1 378 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 ZNF337Q9Y3M9 751 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 PCDHGB7Q9Y5F8 929 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 PHF3Q92576 2039 aaKnown RBP9.46□□□□□ -0.89
SMPD4-201ENST00000351288 EML5Q05BV3 1969 aa9.46□□□□□ -0.89
SMPD4-201ENST00000351288 ZNF407Q9C0G0 2248 aa9.46□□□□□ -0.9
SMPD4-201ENST00000351288 MN1Q10571 1320 aaPredicted RBP9.46□□□□□ -0.9
SMPD4-201ENST00000351288 DCDC2BA2VCK2 349 aa9.46□□□□□ -0.9
SMPD4-201ENST00000351288 OR6C68A6NDL8 312 aa9.46□□□□□ -0.9
SMPD4-201ENST00000351288 MEN1O00255 615 aa9.46□□□□□ -0.9
SMPD4-201ENST00000351288 NOS1APO75052 506 aaPredicted RBP9.46□□□□□ -0.9
SMPD4-201ENST00000351288 OR2J2O76002 312 aa9.46□□□□□ -0.9
SMPD4-201ENST00000351288 KRT33AO76009 404 aa9.46□□□□□ -0.9
SMPD4-201ENST00000351288 CSF2RBP32927 897 aa9.46□□□□□ -0.9
SMPD4-201ENST00000351288 DCDP81605 110 aaKnown RBP9.46□□□□□ -0.9
SMPD4-201ENST00000351288 COL28A1Q2UY09 1125 aa9.46□□□□□ -0.9
SMPD4-201ENST00000351288 PRTGQ2VWP7 1150 aa9.46□□□□□ -0.9
SMPD4-201ENST00000351288 STPG1Q5TH74 334 aa9.46□□□□□ -0.9
SMPD4-201ENST00000351288 EEF1A1P5Q5VTE0 462 aa9.46□□□□□ -0.9
SMPD4-201ENST00000351288 GARNL3Q5VVW2 1013 aa9.46□□□□□ -0.9
SMPD4-201ENST00000351288 APOOLQ6UXV4 268 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms