RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 C17orf82Q86X59 251 aaPredicted RBP13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 DACT3Q96B18 629 aaPredicted RBP13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 PHF7Q9BWX1 381 aaPredicted RBP13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 TBL1XR1Q9BZK7 514 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 MRM2Q9UI43 246 aaKnown RBP13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 LAMP5Q9UJQ1 280 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 MKL2Q9ULH7 1088 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 SPATA2Q9UM82 520 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 IGHV1OR21-1A0A087WYE8 117 aa13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 IGKV3D-11A0A0A0MRZ8 115 aa13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 AKR7A3O95154 331 aa13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 FAPQ12884 760 aa13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 MRPL28Q13084 256 aaKnown RBP13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 IL10RAQ13651 578 aa13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 ISXQ2M1V0 245 aa13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 LANCL3Q6ZV70 420 aa13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 DPY19L4Q7Z388 723 aa13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 SLC35F3Q8IY50 421 aa13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 PM20D2Q8IYS1 436 aa13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 ZNF687Q8N1G0 1237 aa13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 THEM6Q8WUY1 208 aa13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 RNF166Q96A37 237 aaPredicted RBP13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 DPYSL5Q9BPU6 564 aa13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 DPAGT1Q9H3H5 408 aa13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 BEX1Q9HBH7 125 aa13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 EXOSC3Q9NQT5 275 aaKnown RBP13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 ANKRD10Q9NXR5 420 aa13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 MRTO4Q9UKD2 239 aaKnown RBP13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 TP53BP1Q12888 1972 aaPredicted RBP13.52□□□□□ -0.25
VIPAS39-202ENST00000343765 H3BMH7 237 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 GPRIN2O60269 458 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 PRKCAP17252 672 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 HSF2Q03933 536 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 FCN2Q15485 313 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 ELAVL1Q15717 326 aaKnown RBP13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 BICRALQ6AI39 1079 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 LRRC69Q6ZNQ3 347 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 FCRLAQ7L513 359 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 EXD3Q8N9H8 876 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 DNAAF1Q8NEP3 725 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 OR8K3Q8NH51 312 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 FKRPQ9H9S5 495 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 IGHV3-20A0A0C4DH32 117 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 AKR7A2O43488 359 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 PIAS2O75928 621 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 ANKRD34CP0C6C1 535 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 CSF2RBP32927 897 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 SLC25A1P53007 311 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 PITPNAQ00169 270 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 STPG1Q5TH74 334 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 FAM205BPQ63HN1 556 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 UNQ9370/PRO34162Q6UXP9 181 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 CHRDL2Q6WN34 429 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 C16orf47Q6ZP98 133 aaPredicted RBP13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 TIGD4Q8IY51 512 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 OR1F2PQ96R84 312 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 LAT2Q9GZY6 243 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 TTYH1Q9H313 450 aaPredicted RBP13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 LIN7BQ9HAP6 207 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 ZNF304Q9HCX3 659 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 FRRS1LQ9P0K9 344 aa13.51□□□□□ -0.25
VIPAS39-202ENST00000343765 IFITM5A6NNB3 132 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 HLA-DQA2P01906 255 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 TCRBP04435 133 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 SYPP08247 313 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 BCKDHBP21953 392 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 GZMKP49863 264 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 MMP15P51511 669 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 MAB21L1Q13394 359 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 YIF1BQ5BJH7 314 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 UBE2NLQ5JXB2 153 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 ZNF684Q5T5D7 378 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 OR5M10Q6IEU7 315 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 OR5AK2Q8NH90 309 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 OMA1Q96E52 524 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 MESP1Q9BRJ9 268 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 CACNG6Q9BXT2 260 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 ULBP3Q9BZM4 244 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 WWTR1Q9GZV5 400 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 MED28Q9H204 178 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 COPS7AQ9UBW8 275 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 CTSFQ9UBX1 484 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 SLC6A5Q9Y345 797 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 PCDHGA9Q9Y5G4 932 aaKnown RBP13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 CDC40O60508 579 aaKnown RBP eCLIP13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 TRIM3O75382 744 aaPredicted RBP13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 UPK3AO75631 287 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 SLC25A12O75746 678 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 DHFRP00374 187 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 RENP00797 406 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 PTHLHP12272 177 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 S100A1P23297 94 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 ERP29P30040 261 aaKnown RBP13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 SMAD4Q13485 552 aaKnown RBP13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 BTBD16Q32M84 506 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 OGFOD3Q6PK18 319 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 BEST4Q8NFU0 473 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 OR2T4Q8NH00 348 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 OR10AC1Q8NH08 325 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 LILRB4Q8NHJ6 448 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms