RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 LCN6P62502 163 aa16.84■□□□□ 0.29
HOXA9-201ENST00000343483 SLC3A1Q07837 685 aa16.84■□□□□ 0.29
HOXA9-201ENST00000343483 SLC35D3Q5M8T2 416 aa16.84■□□□□ 0.29
HOXA9-201ENST00000343483 RPTNQ6XPR3 784 aa16.84■□□□□ 0.29
HOXA9-201ENST00000343483 ZNF517Q6ZMY9 492 aaPredicted RBP16.84■□□□□ 0.29
HOXA9-201ENST00000343483 VASH1Q7L8A9 365 aaPredicted RBP16.84■□□□□ 0.29
HOXA9-201ENST00000343483 MAMDC2Q7Z304 686 aaPredicted RBP16.84■□□□□ 0.29
HOXA9-201ENST00000343483 OR2T27Q8NH04 317 aa16.84■□□□□ 0.29
HOXA9-201ENST00000343483 TMEM234Q8WY98 164 aa16.84■□□□□ 0.29
HOXA9-201ENST00000343483 TSSK2Q96PF2 358 aa16.84■□□□□ 0.29
HOXA9-201ENST00000343483 SLC22A4Q9H015 551 aa16.84■□□□□ 0.29
HOXA9-201ENST00000343483 MED11Q9P086 117 aa16.84■□□□□ 0.29
HOXA9-201ENST00000343483 NOX1Q9Y5S8 564 aa16.84■□□□□ 0.29
HOXA9-201ENST00000343483 LNP1A1A4G5 178 aa16.83■□□□□ 0.28
HOXA9-201ENST00000343483 ANKUB1A6NFN9 424 aa16.83■□□□□ 0.28
HOXA9-201ENST00000343483 MAGEB4O15481 346 aaPredicted RBP16.83■□□□□ 0.28
HOXA9-201ENST00000343483 PLPP2O43688 288 aa16.83■□□□□ 0.28
HOXA9-201ENST00000343483 ATP6V1G1O75348 118 aa16.83■□□□□ 0.28
HOXA9-201ENST00000343483 NAGAP17050 411 aa16.83■□□□□ 0.28
HOXA9-201ENST00000343483 CD53P19397 219 aa16.83■□□□□ 0.28
HOXA9-201ENST00000343483 APEX1P27695 318 aaKnown RBP16.83■□□□□ 0.28
HOXA9-201ENST00000343483 E2F1Q01094 437 aa16.83■□□□□ 0.28
HOXA9-201ENST00000343483 SPEM2Q0P670 501 aa16.83■□□□□ 0.28
HOXA9-201ENST00000343483 TP53I3Q53FA7 332 aa16.83■□□□□ 0.28
HOXA9-201ENST00000343483 FAM69AQ5T7M9 428 aa16.83■□□□□ 0.28
HOXA9-201ENST00000343483 C1orf140Q5VVS0 124 aa16.83■□□□□ 0.28
HOXA9-201ENST00000343483 RAB43Q86YS6 212 aa16.83■□□□□ 0.28
HOXA9-201ENST00000343483 UBQLNLQ8IYU4 475 aa16.83■□□□□ 0.28
HOXA9-201ENST00000343483 OR5J2Q8NH18 312 aa16.83■□□□□ 0.28
HOXA9-201ENST00000343483 PARD6AQ9NPB6 346 aa16.83■□□□□ 0.28
HOXA9-201ENST00000343483 PCDHGB7Q9Y5F8 929 aa16.83■□□□□ 0.28
HOXA9-201ENST00000343483 B4DXG7 233 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 MT-ATP6P00846 226 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 UMODP07911 640 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 ZNF883P0CG24 379 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 AHCYP23526 432 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 CCKBRP32239 447 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 EVX1P49640 407 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 PCOLCEQ15113 449 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 TRAM1Q15629 374 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 MESTQ5EB52 335 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 METAP1DQ6UB28 335 aaPredicted RBP16.82■□□□□ 0.28
HOXA9-201ENST00000343483 OR10G3Q8NGC4 313 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 SLC22A8Q8TCC7 542 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 TTC9Q92623 222 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 CMKLR1Q99788 373 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 SOSTQ9BQB4 213 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 ALG12Q9BV10 488 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 C11orf54Q9H0W9 315 aaPredicted RBP16.82■□□□□ 0.28
HOXA9-201ENST00000343483 TAS2R5Q9NYW4 299 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 NPAP1Q9NZP6 1156 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 ADAM30Q9UKF2 790 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 VDAC3Q9Y277 283 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 FLRT2O43155 660 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 SEC14L5O43304 696 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 NPIPB7O75200 414 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 GLCEO94923 617 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 TXNDC12O95881 172 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 GRPRP30550 384 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 HTR3AP46098 478 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 ACTA2P62736 377 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 ACTG2P63267 376 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 IL10RAQ13651 578 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 IL18Q14116 193 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 EMC4Q5J8M3 183 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 IDNKQ5T6J7 187 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 ZNF544Q6NX49 715 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 ARSKQ6UWY0 536 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 SNX33Q8WV41 574 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 NPAS1Q99742 590 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 PPP1R3EQ9H7J1 279 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 METTL7AQ9H8H3 244 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 NCDNQ9UBB6 729 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 ZNF346Q9UL40 294 aaKnown RBP16.82■□□□□ 0.28
HOXA9-201ENST00000343483 MPDZO75970 2070 aa16.82■□□□□ 0.28
HOXA9-201ENST00000343483 KLF7O75840 302 aaPredicted RBP16.81■□□□□ 0.28
HOXA9-201ENST00000343483 AHSA1O95433 338 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 PLGP00747 810 aaPredicted RBP16.81■□□□□ 0.28
HOXA9-201ENST00000343483 SLC2A2P11168 524 aaPredicted RBP16.81■□□□□ 0.28
HOXA9-201ENST00000343483 PRKCAP17252 672 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 SHC1P29353 583 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 ACVR1BP36896 505 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 CAPZA2P47755 286 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 SLC25A1P53007 311 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 NR2C2APQ86WQ0 139 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 ABHD4Q8TB40 342 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 ACOT12Q8WYK0 555 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 PPIL3Q9H2H8 161 aaKnown RBP16.81■□□□□ 0.28
HOXA9-201ENST00000343483 SRA1Q9HD15 236 aaKnown RBP16.81■□□□□ 0.28
HOXA9-201ENST00000343483 AKAP7Q9P0M2 348 aaPredicted RBP16.81■□□□□ 0.28
HOXA9-201ENST00000343483 PPP4R1LQ9P1A2 415 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 B3GALT1Q9Y5Z6 326 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 LOC102723996A0A087X1L8 192 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 SLC19A2O60779 497 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 CCNKO75909 580 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 CELA2AP08217 269 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 P2RY14Q15391 338 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 SGCBQ16585 318 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.81■□□□□ 0.28
HOXA9-201ENST00000343483 FAM27D1Q5T7N8 215 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms