RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SERINC4A6NH21 518 aa7.45□□□□□ -1.22
UBE4B-202ENST00000343090 S100PP25815 95 aa7.45□□□□□ -1.22
UBE4B-202ENST00000343090 EEF1A2Q05639 463 aaKnown RBP7.45□□□□□ -1.22
UBE4B-202ENST00000343090 PDZK1IP1Q13113 114 aa7.45□□□□□ -1.22
UBE4B-202ENST00000343090 TMEM52BQ4KMG9 183 aa7.45□□□□□ -1.22
UBE4B-202ENST00000343090 RNF113BQ8IZP6 322 aaKnown RBP7.45□□□□□ -1.22
UBE4B-202ENST00000343090 OR1M1Q8NGA1 313 aa7.45□□□□□ -1.22
UBE4B-202ENST00000343090 OR8D4Q8NGM9 314 aa7.45□□□□□ -1.22
UBE4B-202ENST00000343090 GABARAPL3Q9BY60 117 aa7.45□□□□□ -1.22
UBE4B-202ENST00000343090 OR10A5Q9H207 317 aa7.45□□□□□ -1.22
UBE4B-202ENST00000343090 HHATLQ9HCP6 504 aa7.45□□□□□ -1.22
UBE4B-202ENST00000343090 APMAPQ9HDC9 416 aa7.45□□□□□ -1.22
UBE4B-202ENST00000343090 PLEKHJ1Q9NW61 149 aa7.45□□□□□ -1.22
UBE4B-202ENST00000343090 THAP10Q9P2Z0 257 aaPredicted RBP7.45□□□□□ -1.22
UBE4B-202ENST00000343090 ZNF225Q9UK10 706 aa7.45□□□□□ -1.22
UBE4B-202ENST00000343090 RREB1Q92766 1687 aa7.45□□□□□ -1.22
UBE4B-202ENST00000343090 SMCHD1A6NHR9 2005 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 ADAMTSL1Q8N6G6 1762 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 A6NIZ1 184 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 OR2T1O43869 369 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 ATG12O94817 140 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 FPR3P25089 353 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 PRKAR1BP31321 381 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 CAMLGP49069 296 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 MEOX2P50222 304 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 RAP1BP61224 184 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 RAP1AP62834 184 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 IL13RA1P78552 427 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 MELKQ14680 651 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 MED25Q71SY5 747 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 BHLHA9Q7RTU4 235 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 GLB1L2Q8IW92 636 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 CMIPQ8IY22 773 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 OR4Q3Q8NH05 313 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 PATE1Q8WXA2 126 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 MS4A6EQ96DS6 147 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 SENP5Q96HI0 755 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-202ENST00000343090 SMIM3Q9BZL3 60 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 HRH4Q9H3N8 390 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 SLC6A20Q9NP91 592 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 ACKR4Q9NPB9 350 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 MED17Q9NVC6 651 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 PLEK2Q9NYT0 353 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 A0A087WUU8 490 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 LINC00862A6NCI5 91 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 C2orf72A6NCS6 295 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 TUBAL3A6NHL2 446 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 DVL2O14641 736 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 PRKNO60260 465 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-202ENST00000343090 DIRAS3O95661 229 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 EPHA1P21709 976 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 PTBP1P26599 531 aaKnown RBP eCLIP7.44□□□□□ -1.223e-7■■■■■ 40.6
UBE4B-202ENST00000343090 MSX1P28360 303 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 CCR2P41597 374 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 LIM2P55344 173 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 SNRPGP62308 76 aaKnown RBP7.44□□□□□ -1.22
UBE4B-202ENST00000343090 B4GALNT1Q00973 533 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 TNK1Q13470 666 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 TMEM65Q6PI78 240 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 ZSCAN4Q8NAM6 433 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-202ENST00000343090 DVL3Q92997 716 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-202ENST00000343090 ARHGAP9Q9BRR9 750 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 NRSN2Q9GZP1 204 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 WSB2Q9NYS7 404 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-202ENST00000343090 SLC23A2Q9UGH3 650 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 LINC01553A4QN01 128 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 ZNF98A6NK75 572 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 MAGEB4O15481 346 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-202ENST00000343090 SUSD5O60279 629 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 ZNF254O75437 659 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 CTSLP07711 333 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 SERPINA2P20848 420 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 CD38P28907 300 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 DUSP3P51452 185 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-202ENST00000343090 TSSK4Q6SA08 328 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 OR6V1Q8N148 313 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 TMEM99Q8N816 258 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 RELL2Q8NC24 303 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-202ENST00000343090 VN1R2Q8NFZ6 395 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 TMEM106AQ96A25 262 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 ZBTB8AQ96BR9 441 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 CDCA3Q99618 268 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-202ENST00000343090 MAP3K3Q99759 626 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 MICU1Q9BPX6 476 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 PDCD1LG2Q9BQ51 273 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 STRADBQ9C0K7 418 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 MS4A7Q9GZW8 240 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-202ENST00000343090 ZMAT3Q9HA38 289 aaKnown RBP7.44□□□□□ -1.22
UBE4B-202ENST00000343090 NRIP3Q9NQ35 241 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 TBC1D29Q9UFV1 150 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 MICAL3Q7RTP6 2002 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 SMCO3A2RU48 225 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 FCMRO60667 390 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 ITGBL1O95965 494 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-202ENST00000343090 OR8U9P0C7N5 309 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 MALLQ13021 153 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 MEX3BQ6ZN04 569 aaKnown RBP7.44□□□□□ -1.22
UBE4B-202ENST00000343090 LINC00346Q8IVM7 164 aa7.44□□□□□ -1.22
UBE4B-202ENST00000343090 STEAP2Q8NFT2 490 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms