RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 COPS9Q8WXC6 57 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 SCML1Q9UN30 329 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 DEPDC5O75140 1603 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 KLRG2A4D1S0 409 aaPredicted RBP16.44■□□□□ 0.22
SMAD4-201ENST00000342988 NPIPB15A6NHN6 443 aaPredicted RBP16.44■□□□□ 0.22
SMAD4-201ENST00000342988 OR7C2O60412 319 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 TGFBR1P36897 503 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 NHLH1Q02575 133 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 NHLH2Q02577 135 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 PIGFQ07326 219 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 WDR88Q6ZMY6 472 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 OR10AD1Q8NGE0 317 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 TCRBV7S2A1N4TA0A589 114 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 AGTR2P50052 363 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 PDZD11Q5EBL8 140 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 DVL3Q92997 716 aaPredicted RBP16.44■□□□□ 0.22
SMAD4-201ENST00000342988 RANGRFQ9HD47 186 aaPredicted RBP16.44■□□□□ 0.22
SMAD4-201ENST00000342988 STRAPQ9Y3F4 350 aaKnown RBP16.44■□□□□ 0.22
SMAD4-201ENST00000342988 ITGAMP11215 1152 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 RPS26P62854 115 aaKnown RBP16.43■□□□□ 0.22
SMAD4-201ENST00000342988 SHC2P98077 582 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 MLLT11Q13015 90 aaPredicted RBP16.43■□□□□ 0.22
SMAD4-201ENST00000342988 ZNF628Q5EBL2 1059 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 TRIM61Q5EBN2 209 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 FBXL22Q6P050 247 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 CPOQ8IVL8 374 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 ARPC3O15145 178 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 NAGAP17050 411 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 PPP1CBP62140 327 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 OR5H6Q8NGV6 325 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 TMEM239Q8WW34 195 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 GABARAPL1Q9H0R8 117 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 AK3Q9UIJ7 227 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 RIMS3Q9UJD0 308 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 LIPCP11150 499 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 TP53I3Q53FA7 332 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 SLC2A9Q9NRM0 540 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 YIF1AO95070 293 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 GLAP06280 429 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 GDF1P27539 372 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 GPLD1P80108 840 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 SQSTM1Q13501 440 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 C9orf152Q5JTZ5 239 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 BTNL3Q6UXE8 466 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 SCCPDHQ8NBX0 429 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 RBPMSQ93062 196 aaKnown RBP16.43■□□□□ 0.22
SMAD4-201ENST00000342988 PREX1Q8TCU6 1659 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 HSD17B6O14756 317 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 GATCO43716 136 aaKnown RBP16.43■□□□□ 0.22
SMAD4-201ENST00000342988 ZNF85Q03923 595 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 PDZK1IP1Q13113 114 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 NCBP2-AS2Q69YL0 99 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 CLEC20AQ6ZU45 233 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 MACROD1Q9BQ69 325 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 IER3IP1Q9Y5U9 82 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 PIRO00625 290 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 KLF8O95600 359 aaPredicted RBP16.43■□□□□ 0.22
SMAD4-201ENST00000342988 EMC10Q5UCC4 262 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 H3F3CQ6NXT2 135 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 OR1J1Q8NGS3 322 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 CIB3Q96Q77 187 aaPredicted RBP16.43■□□□□ 0.22
SMAD4-201ENST00000342988 STYXL1Q9Y6J8 313 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 SPTA1P02549 2419 aa16.43■□□□□ 0.22
SMAD4-201ENST00000342988 DEGS1O15121 323 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 CER1O95813 267 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 SLC25A6P12236 298 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 HNF1AP20823 631 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 ERVFC1-1P60608 527 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 SELENOWP63302 87 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 Q6ZTK2 550 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 ZPBPQ9BS86 351 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 ULBP2Q9BZM5 246 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 OCEL1Q9H607 264 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 SRPK3Q9UPE1 567 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 FOXO6A8MYZ6 492 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 C17orf105B2RV13 164 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 LGI1O95970 557 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 FCGR2AP12318 317 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 LGI3Q8N145 548 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 CLDN19Q8N6F1 224 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 OR4K5Q8NGD3 323 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 RPL3LQ92901 407 aaKnown RBP16.42■□□□□ 0.22
SMAD4-201ENST00000342988 HS3ST4Q9Y661 456 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 LOC102724200A0A096LPH7 203 aaPredicted RBP16.42■□□□□ 0.22
SMAD4-201ENST00000342988 TMEM221A6NGB7 291 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 CACNG3O60359 315 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 REEP5Q00765 189 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 RELAQ04206 551 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 GMPR2Q9P2T1 348 aaKnown RBP16.42■□□□□ 0.22
SMAD4-201ENST00000342988 CADP27708 2225 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 ASB13Q8WXK3 278 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 FBXL18Q96ME1 805 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 H3BVH4 76 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 APEX1P27695 318 aaKnown RBP16.42■□□□□ 0.22
SMAD4-201ENST00000342988 HIST1H3AP68431 136 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 SLC22A24Q8N4F4 322 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 OR6K3Q8NGY3 331 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 PARD6AQ9NPB6 346 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 MUTYHQ9UIF7 546 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 CST3P01034 146 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms