RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 ZNF281Q9Y2X9 895 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 PPIL1Q9Y3C6 166 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 TRIP12Q14669 1992 aaPredicted RBP16.97■□□□□ 0.31
SMPD1-201ENST00000342245 TCAPO15273 167 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 BCAT2O15382 392 aaPredicted RBP16.96■□□□□ 0.31
SMPD1-201ENST00000342245 IGSF6O95976 241 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 MAOAP21397 527 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 ATP1B3P54709 279 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 TAS2R19P59542 299 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 EIF5AP63241 154 aaKnown RBP16.96■□□□□ 0.31
SMPD1-201ENST00000342245 DPPA4Q7L190 304 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 OR4K17Q8NGC6 315 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 OR4K14Q8NGD5 310 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 TMEM255BQ8WV15 326 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 ZNF480Q8WV37 535 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 GAR1Q9NY12 217 aaKnown RBP16.96■□□□□ 0.31
SMPD1-201ENST00000342245 NOP16Q9Y3C1 178 aaKnown RBP16.96■□□□□ 0.31
SMPD1-201ENST00000342245 URADA6NGE7 173 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 TSTD3H0UI37 97 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 ZNF208O43345 1280 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 DDTP30046 118 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 MAS1LP35410 378 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 LTBQ06643 244 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 FUT5Q11128 374 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 ATPAF1Q5TC12 328 aaPredicted RBP16.96■□□□□ 0.31
SMPD1-201ENST00000342245 PRAMEF17Q5VTA0 474 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 SSX6Q7RTT6 188 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 NUDT13Q86X67 352 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 SNX33Q8WV41 574 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 C3orf49Q96BT1 292 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 PTPN18Q99952 460 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 SIDT1Q9NXL6 827 aaKnown RBP16.96■□□□□ 0.31
SMPD1-201ENST00000342245 FAM96BQ9Y3D0 163 aa16.96■□□□□ 0.31
SMPD1-201ENST00000342245 NUP210Q8TEM1 1887 aaPredicted RBP16.96■□□□□ 0.31
SMPD1-201ENST00000342245 DNAJB6O75190 326 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 FBXO24O75426 580 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 CORO1AP31146 461 aaKnown RBP16.95■□□□□ 0.3
SMPD1-201ENST00000342245 DVL1P1P54792 670 aaPredicted RBP16.95■□□□□ 0.3
SMPD1-201ENST00000342245 CLDN12P56749 244 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 ELAVL1Q15717 326 aaKnown RBP16.95■□□□□ 0.3
SMPD1-201ENST00000342245 LRRC37A5PQ49AS3 106 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 KRBOX4Q5JUW0 171 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 NSUN5P2Q63ZY6 315 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 OR2G2Q8NGZ5 317 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 OR4C6Q8NH72 309 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 RPS4Y2Q8TD47 263 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 MYLIPQ8WY64 445 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 ZBTB8AQ96BR9 441 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 MICU1Q9BPX6 476 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 SULT4A1Q9BR01 284 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 RSRP1Q9BUV0 290 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 SLC25A18Q9H1K4 315 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 BTBD17A6NE02 478 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 P2RX6O15547 441 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 COX5BP10606 129 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 RAB4AP20338 218 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 PRSS3P35030 304 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 SPINT3P49223 89 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 RPS15P62841 145 aaKnown RBP16.95■□□□□ 0.3
SMPD1-201ENST00000342245 HTRA3P83110 453 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 DHRS2Q13268 280 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 SKP2Q13309 424 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 BIKQ13323 160 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 ATXN7L3Q14CW9 347 aaPredicted RBP16.95■□□□□ 0.3
SMPD1-201ENST00000342245 ANKRD16Q6P6B7 361 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 TMEM205Q6UW68 189 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 ZNF227Q86WZ6 799 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 CLEC1AQ8NC01 280 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 S100PBPQ96BU1 408 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 FOXRED1Q96CU9 486 aaPredicted RBP16.95■□□□□ 0.3
SMPD1-201ENST00000342245 MARS2Q96GW9 593 aaKnown RBP16.95■□□□□ 0.3
SMPD1-201ENST00000342245 LRFN5Q96NI6 719 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 NECAB3Q96P71 396 aaPredicted RBP16.95■□□□□ 0.3
SMPD1-201ENST00000342245 ACTRT3Q9BYD9 372 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 DUSP15Q9H1R2 295 aaPredicted RBP16.95■□□□□ 0.3
SMPD1-201ENST00000342245 OR51B4Q9Y5P0 310 aa16.95■□□□□ 0.3
SMPD1-201ENST00000342245 A6NLC8 198 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 PLPP1O14494 284 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 EIF1AYO14602 144 aaKnown RBP16.94■□□□□ 0.3
SMPD1-201ENST00000342245 ADH1AP07327 375 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 EIF1AXP47813 144 aaKnown RBP16.94■□□□□ 0.3
SMPD1-201ENST00000342245 TGM3Q08188 693 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 CCL14Q16627 93 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 TMEM229BQ8NBD8 167 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 OR56B1Q8NGI3 324 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 OR1J2Q8NGS2 313 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 S100A13Q99584 98 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 SLC27A6Q9Y2P4 619 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 GPR55Q9Y2T6 319 aaPredicted RBP16.94■□□□□ 0.3
SMPD1-201ENST00000342245 SLC45A1Q9Y2W3 748 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 TRBV6-7A0A0A0MS04 114 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 TVP23AA6NH52 213 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 FGF19O95750 216 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 SLC6A9P48067 706 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 FOXO1Q12778 655 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 NCMAPQ5T1S8 102 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 KHDRBS2Q5VWX1 349 aaKnown RBP16.94■□□□□ 0.3
SMPD1-201ENST00000342245 CDK20Q8IZL9 346 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 TMED6Q8WW62 240 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 CNN2Q99439 309 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms