RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 ZCCHC4Q9H5U6 513 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 EXOSC3Q9NQT5 275 aaKnown RBP13.63□□□□□ -0.23
TPM3-208ENST00000341485 SLC22A11Q9NSA0 550 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 HIF3AQ9Y2N7 669 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 COL5A1P20908 1838 aaPredicted RBP13.63□□□□□ -0.23
TPM3-208ENST00000341485 IDSB3KWA1 339 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 CDX4O14627 284 aaPredicted RBP13.63□□□□□ -0.23
TPM3-208ENST00000341485 EEF1E1O43324 174 aaKnown RBP13.63□□□□□ -0.23
TPM3-208ENST00000341485 EPXP11678 715 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 TCEA1P23193 301 aaKnown RBP13.63□□□□□ -0.23
TPM3-208ENST00000341485 GRPRP30550 384 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 EGR4Q05215 589 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 LTBQ06643 244 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 UNQ9370/PRO34162Q6UXP9 181 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 NOXA1Q86UR1 476 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 NAXDQ8IW45 347 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 PRR22Q8IZ63 422 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 EXD3Q8N9H8 876 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 TGIF2Q9GZN2 237 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 MMP25Q9NPA2 562 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 RPRD1BQ9NQG5 326 aaKnown RBP13.63□□□□□ -0.23
TPM3-208ENST00000341485 AKAP7Q9P0M2 348 aaPredicted RBP13.63□□□□□ -0.23
TPM3-208ENST00000341485 ZNF346Q9UL40 294 aaKnown RBP13.63□□□□□ -0.23
TPM3-208ENST00000341485 BOLA1Q9Y3E2 137 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 BDP1A6H8Y1 2624 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 FAM172BPA6NC97 362 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 FRG2CA6NGY1 282 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 PRR33A8MZF0 331 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 ZNF264O43296 627 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 CPNE3O75131 537 aaKnown RBP13.62□□□□□ -0.23
TPM3-208ENST00000341485 GATBO75879 557 aaKnown RBP13.62□□□□□ -0.23
TPM3-208ENST00000341485 ARL6IP5O75915 188 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 DDAH2O95865 285 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 IGKV3-11P04433 115 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 HEXBP07686 556 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 CD14P08571 375 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 CD59P13987 128 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 RORAP35398 523 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 EFNA3P52797 238 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 CCDC58Q4VC31 144 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 PYHIN1Q6K0P9 492 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 LSM14AQ8ND56 463 aaKnown RBP13.62□□□□□ -0.23
TPM3-208ENST00000341485 PLPP5Q8NEB5 264 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 RPS4Y2Q8TD47 263 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 ZNF721Q8TF20 911 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 OIT3Q8WWZ8 545 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 DAZLQ92904 295 aaKnown RBP13.62□□□□□ -0.23
TPM3-208ENST00000341485 ADIPOR1Q96A54 375 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 TSSK2Q96PF2 358 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 ALG12Q9BV10 488 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 RTN4RQ9BZR6 473 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 TMEM9BQ9NQ34 198 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 NANSQ9NR45 359 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 CLEC4AQ9UMR7 237 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 PSMD9O00233 223 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 ORC5O43913 435 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 ASAH2BP0C7U1 165 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 AHCYP23526 432 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 SLC6A1P30531 599 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 HOXD11P31277 338 aaPredicted RBP13.62□□□□□ -0.23
TPM3-208ENST00000341485 SLC25A1P53007 311 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 CTXN1P60606 82 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 HSF2Q03933 536 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 SPEM2Q0P670 501 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 CDK10Q15131 360 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 PLA1AQ53H76 456 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 ALG10Q5BKT4 473 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 ZNF684Q5T5D7 378 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 OVCH1Q7RTY7 1134 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 JAZF1Q86VZ6 243 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 ZNF511Q8NB15 262 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 RNF166Q96A37 237 aaPredicted RBP13.62□□□□□ -0.23
TPM3-208ENST00000341485 MRPL48Q96GC5 212 aaKnown RBP13.62□□□□□ -0.23
TPM3-208ENST00000341485 LCORQ96JN0 433 aaPredicted RBP13.62□□□□□ -0.23
TPM3-208ENST00000341485 ADOQ96SZ5 270 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 PLSCR3Q9NRY6 295 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 RXFP3Q9NSD7 469 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 ABRACLQ9P1F3 81 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 SLC6A5Q9Y345 797 aa13.62□□□□□ -0.23
TPM3-208ENST00000341485 AK6Q9Y3D8 172 aaKnown RBP13.62□□□□□ -0.23
TPM3-208ENST00000341485 IGLV3-12A0A075B6K2 115 aa13.61□□□□□ -0.23
TPM3-208ENST00000341485 INMT-MINDY4F8WBC2 141 aa13.61□□□□□ -0.23
TPM3-208ENST00000341485 TNFRSF10AO00220 468 aa13.61□□□□□ -0.23
TPM3-208ENST00000341485 ICOSLGO75144 302 aa13.61□□□□□ -0.23
TPM3-208ENST00000341485 TRIM3O75382 744 aaPredicted RBP13.61□□□□□ -0.23
TPM3-208ENST00000341485 CCL4P13236 92 aa13.61□□□□□ -0.23
TPM3-208ENST00000341485 ARSBP15848 533 aa13.61□□□□□ -0.23
TPM3-208ENST00000341485 UQCRC1P31930 480 aa13.61□□□□□ -0.23
TPM3-208ENST00000341485 BTCP35070 178 aa13.61□□□□□ -0.23
TPM3-208ENST00000341485 HSD17B12Q53GQ0 312 aa13.61□□□□□ -0.23
TPM3-208ENST00000341485 TCTE3Q8IZS6 198 aa13.61□□□□□ -0.23
TPM3-208ENST00000341485 YIPF7Q8N8F6 280 aa13.61□□□□□ -0.23
TPM3-208ENST00000341485 ORAI1Q96D31 301 aa13.61□□□□□ -0.23
TPM3-208ENST00000341485 KTI12Q96EK9 354 aaPredicted RBP13.61□□□□□ -0.23
TPM3-208ENST00000341485 LPAR4Q99677 370 aa13.61□□□□□ -0.23
TPM3-208ENST00000341485 NUDT9Q9BW91 350 aa13.61□□□□□ -0.23
TPM3-208ENST00000341485 MFRPQ9BY79 579 aa13.61□□□□□ -0.23
TPM3-208ENST00000341485 PAQR5Q9NXK6 330 aaPredicted RBP13.61□□□□□ -0.23
TPM3-208ENST00000341485 FER1L5A0AVI2 2057 aa13.61□□□□□ -0.23
TPM3-208ENST00000341485 PIN1P1O15428 100 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms