RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 SPERTQ8NA61 448 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 TMEM106AQ96A25 262 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 ANKRD9Q96BM1 317 aaPredicted RBP13.15□□□□□ -0.3
CPSF7-201ENST00000340437 LINC00052Q96N35 136 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 MOGAT1Q96PD6 335 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 GAL3ST4Q96RP7 486 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 CACNA1GO43497 2377 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 B4DGG1 531 aa13.15□□□□□ -0.31
CPSF7-201ENST00000340437 AIPO00170 330 aa13.15□□□□□ -0.31
CPSF7-201ENST00000340437 ZNF35P13682 527 aa13.15□□□□□ -0.31
CPSF7-201ENST00000340437 NFYAP23511 347 aaPredicted RBP13.15□□□□□ -0.31
CPSF7-201ENST00000340437 TAS2R20P59543 309 aa13.15□□□□□ -0.31
CPSF7-201ENST00000340437 GRM7Q14831 915 aa13.15□□□□□ -0.31
CPSF7-201ENST00000340437 C9orf50Q5SZB4 431 aa13.15□□□□□ -0.31
CPSF7-201ENST00000340437 IDO2Q6ZQW0 420 aa13.15□□□□□ -0.31
CPSF7-201ENST00000340437 NT5CQ8TCD5 201 aa13.15□□□□□ -0.31
CPSF7-201ENST00000340437 RGP1Q92546 391 aaPredicted RBP13.15□□□□□ -0.31
CPSF7-201ENST00000340437 WDR76Q9H967 626 aa13.15□□□□□ -0.31
CPSF7-201ENST00000340437 Q9N2J8 555 aa13.15□□□□□ -0.31
CPSF7-201ENST00000340437 AKAP7Q9P0M2 348 aaPredicted RBP13.15□□□□□ -0.31
CPSF7-201ENST00000340437 SLC6A5Q9Y345 797 aa13.15□□□□□ -0.31
CPSF7-201ENST00000340437 TRAV8-7A0A075B6U6 113 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 UBE2QL1A1L167 161 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 GALR3O60755 368 aaPredicted RBP13.14□□□□□ -0.31
CPSF7-201ENST00000340437 RBBP9O75884 186 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 ST6GAL1P15907 406 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 NUDT1P36639 197 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 C2orf68Q2NKX9 166 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 BEX5Q5H9J7 111 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 CBLN3Q6UW01 205 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 ZNF627Q7L945 461 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 ZBTB44Q8NCP5 570 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 GPN1Q9HCN4 374 aaPredicted RBP13.14□□□□□ -0.31
CPSF7-201ENST00000340437 PRDM9Q9NQV7 894 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 KLF15Q9UIH9 416 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 BAIAP2Q9UQB8 552 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 RPS10-NUDT3A0A1W2PQS6 291 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 GABARAPH6UMI1 98 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 ACSM4P0C7M7 580 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 GAAP10253 952 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 CTSEP14091 401 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 NTSR1P30989 418 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 CCKBRP32239 447 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 LTBQ06643 244 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 MGAT2Q10469 447 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 CDONQ4KMG0 1287 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 NDUFAF7Q7L592 441 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 POMGNT2Q8NAT1 580 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 RELL2Q8NC24 303 aaPredicted RBP13.14□□□□□ -0.31
CPSF7-201ENST00000340437 BMFQ96LC9 184 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 STACQ99469 402 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 PNO1Q9NRX1 252 aaKnown RBP13.14□□□□□ -0.31
CPSF7-201ENST00000340437 CPNE7Q9UBL6 633 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 FBXL2Q9UKC9 423 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 FOXJ3Q9UPW0 622 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 PLRG1O43660 514 aaKnown RBP13.14□□□□□ -0.31
CPSF7-201ENST00000340437 EFNB2P52799 333 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 DYRK1AQ13627 763 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 PWWP2BQ6NUJ5 590 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 Q6ZSR6 202 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 OR14A16Q8NHC5 309 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 DGAT2Q96PD7 388 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 NRSN2Q9GZP1 204 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 SYT4Q9H2B2 425 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 POMT2Q9UKY4 750 aa13.14□□□□□ -0.31
CPSF7-201ENST00000340437 FARSAQ9Y285 508 aaKnown RBP13.14□□□□□ -0.31
CPSF7-201ENST00000340437 C2orf74A8MZ97 194 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 APEHP13798 732 aaKnown RBP13.13□□□□□ -0.31
CPSF7-201ENST00000340437 CD53P19397 219 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 RPS4Y1P22090 263 aaKnown RBP13.13□□□□□ -0.31
CPSF7-201ENST00000340437 FCARP24071 287 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 DPP4P27487 766 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 ALG10Q5BKT4 473 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 LRRN1Q6UXK5 716 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 ATOH1Q92858 354 aaPredicted RBP13.13□□□□□ -0.31
CPSF7-201ENST00000340437 PMEPA1Q969W9 287 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 MMABQ96EY8 250 aaPredicted RBP13.13□□□□□ -0.31
CPSF7-201ENST00000340437 NARS2Q96I59 477 aaKnown RBP13.13□□□□□ -0.31
CPSF7-201ENST00000340437 MYADMQ96S97 322 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 ANKRD10Q9NXR5 420 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 NTMQ9P121 344 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 GRHPRQ9UBQ7 328 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 K7EQS6 105 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 SHOXO15266 292 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 OIP5O43482 229 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 ECDO95905 644 aaPredicted RBP13.13□□□□□ -0.31
CPSF7-201ENST00000340437 ADRA2CP18825 462 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 ARFIP1P53367 373 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 FHL1Q13642 323 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 NFATC4Q14934 902 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 CLLU1Q5K131 121 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 FAM69AQ5T7M9 428 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 HACD4Q5VWC8 232 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 ZNF550Q7Z398 422 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 OR51S1Q8NGJ8 323 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 HAVCR2Q8TDQ0 301 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 TM4SF19Q96DZ7 209 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 MRPL48Q96GC5 212 aaKnown RBP13.13□□□□□ -0.31
CPSF7-201ENST00000340437 KLHDC3Q9BQ90 382 aa13.13□□□□□ -0.31
CPSF7-201ENST00000340437 EXO5Q9H790 373 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms