RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ZNF583Q96ND8 569 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 ALKBH3Q96Q83 286 aaPredicted RBP11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 HOPXQ9BPY8 73 aaPredicted RBP11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 WFDC6Q9BQY6 131 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 ZNF426Q9BUY5 554 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 SEC14L4Q9UDX3 406 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 POU2F3Q9UKI9 436 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 ARPC4-TTLL3A0A0A6YYG9 625 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 MS4A18H0YCH9 400 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 M0R1B8 84 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 TRAF3IP2O43734 574 aaPredicted RBP11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 OR6A2O95222 327 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 IGF2P01344 180 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 SOD3P08294 240 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 THRBP10828 461 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 RBM34P42696 430 aaKnown RBP11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 CRYBA2P53672 197 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 ATP5J2P56134 94 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 ROR2Q01974 943 aaKnown RBP11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 PGGHGQ32M88 737 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 MS4A18Q3C1V0 323 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 TBRG1Q3YBR2 411 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 LINC01559Q495D7 138 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 ZNF544Q6NX49 715 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 TMEM123Q8N131 208 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 KDM8Q8N371 416 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 FAM169BQ8N8A8 192 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 OR5J2Q8NH18 312 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 VANGL1Q8TAA9 524 aaPredicted RBP11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 LZICQ8WZA0 190 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 RCN3Q96D15 328 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 Q96MF0 132 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 MOGAT1Q96PD6 335 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 OR2M2Q96R28 347 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 DHRS9Q9BPW9 319 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 TRAF4Q9BUZ4 470 aaPredicted RBP11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 EFCAB1Q9HAE3 211 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 B3GAT2Q9NPZ5 323 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 ARMCX1Q9P291 453 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 ZNF229Q9UJW7 825 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 SLC7A7Q9UM01 511 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 SH3GLB1Q9Y371 365 aa11.67□□□□□ -0.54
SIRPB3P-201ENST00000340424 A0A1W2PR80 420 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 ELOVL7A1L3X0 281 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 HTR3EA5X5Y0 456 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 PLPP3O14495 311 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 UPK3AO75631 287 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 ATP5HO75947 161 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 UBOX5O94941 541 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 OR5F1O95221 314 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 INHBBP09529 407 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 BMP4P12644 408 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 CDH2P19022 906 aaPredicted RBP11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 IFNA8P32881 189 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 KDELR2P33947 212 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 POU3F1Q03052 451 aaPredicted RBP11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 LTBQ06643 244 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 SF3A3Q12874 501 aaKnown RBP eCLIP11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 ZNF74Q16587 644 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 HIKESHIQ53FT3 197 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 HACD2Q6Y1H2 254 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 ASRGL1Q7L266 308 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 CARM1Q86X55 608 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 RBM45Q8IUH3 476 aaKnown RBP11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 MICU2Q8IYU8 434 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 OR4D11Q8NGI4 311 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 BCL2L2Q92843 193 aaPredicted RBP11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 NEUROG1Q92886 237 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 CMTM5Q96DZ9 223 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 COX4I2Q96KJ9 171 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 ADAD1Q96M93 576 aaKnown RBP11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 KATNB1Q9BVA0 655 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 BARX1Q9HBU1 254 aaPredicted RBP11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 GPR35Q9HC97 309 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 NANSQ9NR45 359 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 CRNNQ9UBG3 495 aaPredicted RBP11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 ACANP16112 2415 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 CADP27708 2225 aa11.66□□□□□ -0.54
SIRPB3P-201ENST00000340424 NF1P21359 2839 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 ZNF726A6NNF4 738 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 ZNF99A8MXY4 864 aaPredicted RBP11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 ENTPD5O75356 428 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 LYPD3O95274 346 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 ATP6V1G2O95670 118 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 HIST1H2ABP04908 130 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 ADORA3P0DMS8 318 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 COX4I1P13073 169 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 CBLP22681 906 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 AHCYP23526 432 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 TTKP33981 857 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 TAS2R41P59536 307 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 SLC25A3Q00325 362 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 ZP4Q12836 540 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 LRRC23Q53EV4 343 aaPredicted RBP11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 CYBRD1Q53TN4 286 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 WDR88Q6ZMY6 472 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 HIST3H2AQ7L7L0 130 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 LSRQ86X29 649 aaPredicted RBP11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 C20orf196Q8IYI0 205 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 FBXL14Q8N1E6 418 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms