RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ASB4Q9Y574 426 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 PCDHGB6Q9Y5F9 930 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 CNOT4O95628 575 aaKnown RBP11.7□□□□□ -0.54
LIN54-201ENST00000340417 RLN2P04090 185 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 FAM157BP0CG42 384 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 TBXA2RP21731 343 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 MSR1P21757 451 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 MAP2K3P46734 347 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 PLAG1Q6DJT9 500 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 PLET1Q6UQ28 207 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 BHLHE23Q8NDY6 225 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 ACOT12Q8WYK0 555 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 TXNDC15Q96J42 360 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 NMNAT3Q96T66 252 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 HINT2Q9BX68 163 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 WDR12Q9GZL7 423 aaKnown RBP11.7□□□□□ -0.54
LIN54-201ENST00000340417 SIDT1Q9NXL6 827 aaKnown RBP11.7□□□□□ -0.54
LIN54-201ENST00000340417 C5orf51A6NDU8 294 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 PRR35P0CG20 571 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 RBM34P42696 430 aaKnown RBP11.69□□□□□ -0.54
LIN54-201ENST00000340417 RBM39Q14498 530 aaKnown RBP11.69□□□□□ -0.54
LIN54-201ENST00000340417 DHRS4L2Q6PKH6 230 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 TBPL2Q6SJ96 375 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 ZNF793Q6ZN11 406 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 MIB2Q96AX9 1013 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 PPP1R14BQ96C90 147 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 ALG12Q9BV10 488 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 PRMT8Q9NR22 394 aaPredicted RBP11.69□□□□□ -0.54
LIN54-201ENST00000340417 MED17Q9NVC6 651 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 LRRC42Q9Y546 428 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 SHISA8B8ZZ34 492 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 MPIG6BO95866 241 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 SRP14P37108 136 aaKnown RBP11.69□□□□□ -0.54
LIN54-201ENST00000340417 EMDP50402 254 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 ANKRD16Q6P6B7 361 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 ZNF584Q8IVC4 421 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 CRIPAKQ8N1N5 446 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 TAMM41Q96BW9 452 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 C20orf27Q9GZN8 174 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 UBTD1Q9HAC8 227 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 ENPP5Q9UJA9 477 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 TOR1AO14656 332 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 FGF5P12034 268 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 C4orf46Q504U0 113 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 ZNF425Q6IV72 752 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 OR4N2Q8NGD1 307 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 CCDC107Q8WV48 283 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 MYEF2Q9P2K5 600 aaKnown RBP11.69□□□□□ -0.54
LIN54-201ENST00000340417 FBXL3Q9UKT7 428 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 HSPB2A8KAH6 182 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 MASP2O00187 686 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 CLPXO76031 633 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 NXPH2O95156 264 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 SRD5A2P31213 254 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 MAGEA5P43359 124 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 RGS19P49795 217 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 ZNF83P51522 516 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 RAB2AP61019 212 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 HSPB2Q16082 182 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 ST3GAL2Q16842 350 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 GLB1L2Q8IW92 636 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 ZNF454Q8N9F8 522 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 REV1Q9UBZ9 1251 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 ZDBF2Q9HCK1 2354 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 TUBAL3A6NHL2 446 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 SCGB1D2O95969 90 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 HOXA6P31267 233 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 SPHARQ15513 63 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 PFN4Q8NHR9 129 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 TBC1D15Q8TC07 691 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 LMF1Q96S06 567 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 NRTNQ99748 197 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 NEU3Q9UQ49 428 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 RNF6Q9Y252 685 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 CNTRLQ7Z7A1 2325 aa11.69□□□□□ -0.54
LIN54-201ENST00000340417 C5orf49A4QMS7 147 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 GAPDHSO14556 408 aaPredicted RBP11.68□□□□□ -0.54
LIN54-201ENST00000340417 CDX4O14627 284 aaPredicted RBP11.68□□□□□ -0.54
LIN54-201ENST00000340417 SERPINA5P05154 406 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 INSM1Q01101 510 aaPredicted RBP11.68□□□□□ -0.54
LIN54-201ENST00000340417 CDK10Q15131 360 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 RAB35Q15286 201 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 ZNF718Q3SXZ3 478 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 C1orf87Q8N0U7 546 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 MEPEQ9NQ76 525 aaPredicted RBP11.68□□□□□ -0.54
LIN54-201ENST00000340417 PLEKHJ1Q9NW61 149 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 HMX2A2RU54 273 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 PIP5K1CO60331 668 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 FCMRO60667 390 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 PRKACBP22694 351 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 OPRM1P35372 400 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 TIGD3Q6B0B8 471 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 NPSR1Q6W5P4 371 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 ZDHHC16Q969W1 377 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 SCN5AQ14524 2016 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 ADARB1P78563 741 aaKnown RBP11.68□□□□□ -0.54
LIN54-201ENST00000340417 RGS7BPQ6MZT1 257 aaPredicted RBP11.68□□□□□ -0.54
LIN54-201ENST00000340417 CROCCP3Q8IVE0 287 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 SCCPDHQ8NBX0 429 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 RAB2BQ8WUD1 216 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms