RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 DLL4Q9NR61 685 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 MED29Q9NX70 200 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 CISD1Q9NZ45 108 aaKnown RBP12.78□□□□□ -0.36
ERCC1-203ENST00000340192 RIMS3Q9UJD0 308 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 ZNF229Q9UJW7 825 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 NOX1Q9Y5S8 564 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 A0A096LPE4 126 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 A0A1W2PPZ6 126 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 SLC35F4A4IF30 521 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 C11orf98E9PRG8 122 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 M0R3G1 203 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 CXCR6O00574 342 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 GSTA4O15217 222 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 TMCC2O75069 709 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 OR6A2O95222 327 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 GSK3BP49841 420 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 SH3BGRP55822 239 aaPredicted RBP12.77□□□□□ -0.37
ERCC1-203ENST00000340192 ARF1P84077 181 aaKnown RBP12.77□□□□□ -0.37
ERCC1-203ENST00000340192 PHYHD1Q5SRE7 291 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 YTHDF3Q7Z739 585 aaKnown RBP12.77□□□□□ -0.37
ERCC1-203ENST00000340192 VTCN1Q7Z7D3 282 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 WDFY1Q8IWB7 410 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 C20orf196Q8IYI0 205 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 TMEM255BQ8WV15 326 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 LZICQ8WZA0 190 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 ZNF837Q96EG3 531 aaPredicted RBP12.77□□□□□ -0.37
ERCC1-203ENST00000340192 NELFAQ9H3P2 528 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 OBP2BQ9NPH6 170 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 ZNF701Q9NV72 531 aaPredicted RBP12.77□□□□□ -0.37
ERCC1-203ENST00000340192 TAS2R5Q9NYW4 299 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 POU2F3Q9UKI9 436 aa12.77□□□□□ -0.37
ERCC1-203ENST00000340192 ACANP16112 2415 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 OVOL3O00110 214 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 RNF13O43567 381 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 ZNF682O95780 498 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 MT-ND1P03886 318 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 HIST1H2ABP04908 130 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 ASAH2BP0C7U1 165 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 UMPSP11172 480 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 PRDX6P30041 224 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 RBM34P42696 430 aaKnown RBP12.76□□□□□ -0.37
ERCC1-203ENST00000340192 UGT2B15P54855 530 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 UBE2NP61088 152 aaKnown RBP12.76□□□□□ -0.37
ERCC1-203ENST00000340192 PSME3P61289 254 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 CAMK2DQ13557 499 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 CEACAM16Q2WEN9 425 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 PRSS57Q6UWY2 283 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 HIST3H2AQ7L7L0 130 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 SLC46A3Q7Z3Q1 461 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 DEPDC4Q8N2C3 294 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 PFN4Q8NHR9 129 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 MAGEE2Q8TD90 523 aaPredicted RBP12.76□□□□□ -0.37
ERCC1-203ENST00000340192 HIST1H2ACQ93077 130 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 LRR1Q96L50 414 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 Q96MF0 132 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 KCTD14Q9BQ13 255 aaPredicted RBP12.76□□□□□ -0.37
ERCC1-203ENST00000340192 FAIMQ9NVQ4 179 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 ABCD2Q9UBJ2 740 aa12.76□□□□□ -0.37
ERCC1-203ENST00000340192 ARPC4-TTLL3A0A0A6YYG9 625 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 ZNF726A6NNF4 738 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 ZNF99A8MXY4 864 aaPredicted RBP12.75□□□□□ -0.37
ERCC1-203ENST00000340192 E7EQL1 145 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 NDUFAB1O14561 156 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 SERPINA1P01009 418 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 CD8AP01732 235 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 THRBP10828 461 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 IFNGR1P15260 489 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 FOSL1P15407 271 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 BIDP55957 195 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 ATP5J2P56134 94 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 TUBA1BP68363 451 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 TUBA4AP68366 448 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 ZP4Q12836 540 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 B3GLCTQ6Y288 498 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 TUBA1AQ71U36 451 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 SLC35D2Q76EJ3 337 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 NANOGNBQ7Z5D8 188 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 PIGWQ7Z7B1 504 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 ALPK2Q86TB3 2170 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 TMEM239Q8WW34 195 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 GTPBP3Q969Y2 492 aaKnown RBP12.75□□□□□ -0.37
ERCC1-203ENST00000340192 PRRC1Q96M27 445 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 HS6ST2Q96MM7 605 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 SLC38A2Q96QD8 506 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 TRAF4Q9BUZ4 470 aaPredicted RBP12.75□□□□□ -0.37
ERCC1-203ENST00000340192 SPAG4Q9NPE6 437 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 B3GAT2Q9NPZ5 323 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 C20orf141Q9NUB4 165 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 A4GNTQ9UNA3 340 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 ARL2BPQ9Y2Y0 163 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 SNX13Q9Y5W8 968 aa12.75□□□□□ -0.37
ERCC1-203ENST00000340192 PLCE1Q9P212 2302 aa12.74□□□□□ -0.37
ERCC1-203ENST00000340192 USF3Q68DE3 2245 aa12.74□□□□□ -0.37
ERCC1-203ENST00000340192 IGHV1-18A0A0C4DH31 117 aa12.74□□□□□ -0.37
ERCC1-203ENST00000340192 ATP6V1G2-DDX39BF2Z307 99 aa12.74□□□□□ -0.37
ERCC1-203ENST00000340192 BLOC1S5-TXNDC5H3BN57 136 aa12.74□□□□□ -0.37
ERCC1-203ENST00000340192 SEC14L2O76054 403 aa12.74□□□□□ -0.37
ERCC1-203ENST00000340192 OR7A10O76100 309 aa12.74□□□□□ -0.37
ERCC1-203ENST00000340192 IGF2P01344 180 aa12.74□□□□□ -0.37
ERCC1-203ENST00000340192 IFNW1P05000 195 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms