RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 OR10H5Q8NGA6 315 aa10.94□□□□□ -0.66
USP1-201ENST00000339950 ZNF681Q96N22 645 aa10.94□□□□□ -0.66
USP1-201ENST00000339950 MOGAT1Q96PD6 335 aa10.94□□□□□ -0.66
USP1-201ENST00000339950 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.94□□□□□ -0.66
USP1-201ENST00000339950 FGF20Q9NP95 211 aaPredicted RBP10.94□□□□□ -0.66
USP1-201ENST00000339950 CMC2Q9NRP2 79 aa10.94□□□□□ -0.66
USP1-201ENST00000339950 C19orf53Q9UNZ5 99 aaPredicted RBP10.94□□□□□ -0.66
USP1-201ENST00000339950 SLC22A7Q9Y694 548 aa10.94□□□□□ -0.66
USP1-201ENST00000339950 V9GY05 133 aa10.94□□□□□ -0.66
USP1-201ENST00000339950 GPR89AB7ZAQ6 455 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 GPR89BP0CG08 455 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 GLI4P10075 376 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 SRMP19623 302 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 PLCXD2Q0VAA5 305 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 SCRN3Q0VDG4 424 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 KIR2DS3Q14952 304 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 ULK3Q6PHR2 472 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 RELL2Q8NC24 303 aaPredicted RBP10.93□□□□□ -0.66
USP1-201ENST00000339950 OR51Q1Q8NH59 317 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 NXPE2Q96DL1 559 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 OR10A5Q9H207 317 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 MCCC2Q9HCC0 563 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 OR2AT4A6NND4 320 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 ZNF28P17035 718 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 AKR1C4P17516 323 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 ART1P52961 327 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 GRK1Q15835 563 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 ETFDHQ16134 617 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 ZNF550Q7Z398 422 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 OR51A4Q8NGJ6 313 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 ZNRF4Q8WWF5 429 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 ATOH1Q92858 354 aaPredicted RBP10.93□□□□□ -0.66
USP1-201ENST00000339950 MS4A3Q96HJ5 214 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 ERVMER34-1Q9H9K5 563 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 PCDHB16Q9NRJ7 776 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 LAMA1P25391 3075 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 A0A0J9YY10 115 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 AMY2AP04746 511 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 IL32P24001 234 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 SLC6A9P48067 706 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 MNX1P50219 401 aaPredicted RBP10.93□□□□□ -0.66
USP1-201ENST00000339950 ZNF136P52737 540 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 ST3GAL2Q16842 350 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 TMEM201Q5SNT2 666 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 ZNF615Q8N8J6 731 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 OR52N1Q8NH53 320 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 C3orf49Q96BT1 292 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 NXF5Q9H1B4 397 aaKnown RBP10.93□□□□□ -0.66
USP1-201ENST00000339950 GSKIPQ9P0R6 139 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 MN1Q10571 1320 aaPredicted RBP10.93□□□□□ -0.66
USP1-201ENST00000339950 DSPPQ9NZW4 1301 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 ESPL1Q14674 2120 aa10.93□□□□□ -0.66
USP1-201ENST00000339950 OR14I1A6ND48 311 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 ARRDC5A6NEK1 342 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 RP2O75695 350 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 SLC22A5O76082 557 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 ZFPL1O95159 310 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 F10P00742 488 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 C1QBP02746 253 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 IFNA6P05013 189 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 ANKRD34CP0C6C1 535 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 GIMD1P0DJR0 217 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 M6PRP20645 277 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 ARHGAP11BQ3KRB8 267 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 FAM69AQ5T7M9 428 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 ACOT12Q8WYK0 555 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 WDFY2Q96P53 400 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 KCNG2Q9UJ96 466 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 KLHL21Q9UJP4 597 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 SPTAN1Q13813 2472 aaKnown RBP10.92□□□□□ -0.66
USP1-201ENST00000339950 A0A1W2PPL8 197 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 OIP5O43482 229 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 SLC43A1O75387 559 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 TACSTD2P09758 323 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 SPI1P17947 270 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 CDK2P24941 298 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 TCTE1Q5JU00 501 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 SLC6A19Q695T7 634 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 ALKBH2Q6NS38 261 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 MAMSTRQ6ZN01 415 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 ARHGDIGQ99819 225 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 CKLFQ9UBR5 152 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 MAFFQ9ULX9 164 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 RGS13O14921 159 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 SORDQ00796 357 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 CDNFQ49AH0 187 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 YIF1BQ5BJH7 314 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 FAM74A1Q5RGS3 127 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 FCRL6Q6DN72 434 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 SPAG16Q8N0X2 631 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 ZC3H10Q96K80 434 aaKnown RBP10.92□□□□□ -0.66
USP1-201ENST00000339950 DHRS9Q9BPW9 319 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 VSX1Q9NZR4 365 aaPredicted RBP10.92□□□□□ -0.66
USP1-201ENST00000339950 KLRF1Q9NZS2 232 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 ZNF432O94892 652 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 MPZL1O95297 269 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 FARS2O95363 451 aaKnown RBP10.92□□□□□ -0.66
USP1-201ENST00000339950 CD2P06729 351 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 NGFRP08138 427 aa10.92□□□□□ -0.66
USP1-201ENST00000339950 CLDN20P56880 219 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms