RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 FAM157AC9JC47 383 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 H3BSH0 61 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 SCAF4O95104 1147 aaKnown RBP8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 TGFB1P01137 390 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 H1F0P07305 194 aaKnown RBP8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 FGF7P21781 194 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 HSD3B2P26439 372 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 AGTR1P30556 359 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 SLC16A1P53985 500 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 MTAPQ13126 283 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 ZNF177Q13360 481 aaPredicted RBP8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 ZNF311Q5JNZ3 666 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 TMEM69Q5SWH9 247 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 NIPAL3Q6P499 406 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 ANKRD33Q7Z3H0 272 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 GPC2Q8N158 579 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 BHLHE23Q8NDY6 225 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 GPR32P1Q8NGA4 272 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 OR10H4Q8NGA5 316 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 PIK3IP1Q96FE7 263 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 TMEM169Q96HH4 297 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 ALKBH3Q96Q83 286 aaPredicted RBP8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 OR51I1Q9H343 314 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 PARD6AQ9NPB6 346 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 SERINC1Q9NRX5 453 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 FAM120CQ9NX05 1096 aaKnown RBP8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 TGIF2-C20orf24A0A0A6YYL0 155 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 SLC5A10A0PJK1 596 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 GABARAPH6UMI1 98 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 LRP3O75074 770 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 AIFM1O95831 613 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 ERCC1P07992 297 aaPredicted RBP8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 GAAP10253 952 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 AMD1P17707 334 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 MPZP25189 248 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 OR3A1P47881 315 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 CSNK1DP48730 415 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 HTRA3P83110 453 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 ZNF697Q5TEC3 545 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 LYPLAL1Q5VWZ2 237 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 FRRS1Q6ZNA5 592 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 CHST9Q7L1S5 443 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 FBXO16Q8IX29 292 aaPredicted RBP8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 OR4K5Q8NGD3 323 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 PSMG2Q969U7 264 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 HMCESQ96FZ2 354 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 SEMA3CQ99985 751 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 ATG5Q9H1Y0 275 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 LPAR2Q9HBW0 351 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 LPAR3Q9UBY5 353 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 NOP16Q9Y3C1 178 aaKnown RBP8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 PUS1Q9Y606 427 aaKnown RBP eCLIP8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 SIP14410 1827 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 ZNF236Q9UL36 1845 aa8.85□□□□□ -0.99
PTCHD4-201ENST00000339488 TBC1D3DA0A087WVF3 549 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 TBC1D3IA0A087WXS9 549 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 TBC1D3EA0A087X179 549 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 TBC1D3KA0A087X1G2 549 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 TBC1D3FA6NER0 549 aaPredicted RBP8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 TBC1D3LB9A6J9 549 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 C9J4A7 227 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 J3QLW9 94 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 ADAM10O14672 748 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 RAMP1O60894 148 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 FBXO24O75426 580 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 CSN2P05814 226 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 OR13C7P0DN81 318 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 ZNF19P17023 458 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 EPORP19235 508 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 HOXC12P31275 282 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 PMELP40967 661 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 CEBPGP53567 150 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 DCAF7P61962 342 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 SLC7A9P82251 487 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 SCAPQ12770 1279 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 TBC1D3CQ6IPX1 549 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 TEX38Q6PEX7 206 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 IL34Q6ZMJ4 242 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 BAP18Q8IXM2 172 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 TBC1D3Q8IZP1 549 aaPredicted RBP8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 INO80EQ8NBZ0 244 aaPredicted RBP8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 OR10A7Q8NGE5 316 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 OR6K2Q8NGY2 324 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 RAB8BQ92930 207 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 EXTL1Q92935 676 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 FUBP3Q96I24 572 aaKnown RBP eCLIP8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 FAM83CQ9BQN1 747 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 TCEAL2Q9H3H9 227 aaPredicted RBP8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 NLE1Q9NVX2 485 aaPredicted RBP8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 MRPL22Q9NWU5 206 aaKnown RBP8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 CEP350Q5VT06 3117 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 DNAH12Q6ZR08 3092 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 RALGAPA2Q2PPJ7 1873 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 ATXN7O15265 892 aaPredicted RBP8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 TMEM127O75204 238 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 TPT1P13693 172 aaKnown RBP8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 CDK2P24941 298 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 UCP3P55916 312 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 PRAMEF17Q5VTA0 474 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 OLFML2AQ68BL7 652 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms