RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 PDX1P52945 283 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 PIN1Q13526 163 aaPredicted RBP5.1□□□□□ -1.59
CSDE1-202ENST00000339438 TDGQ13569 410 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 RBM39Q14498 530 aaKnown RBP5.1□□□□□ -1.59
CSDE1-202ENST00000339438 SSX2Q16385 188 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 UBE2NLQ5JXB2 153 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 LIPNQ5VXI9 398 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 DMKNQ6E0U4 476 aaPredicted RBP5.1□□□□□ -1.59
CSDE1-202ENST00000339438 TSSK4Q6SA08 328 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 BAIAP2L2Q6UXY1 529 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 FAM83HQ6ZRV2 1179 aaPredicted RBP5.1□□□□□ -1.59
CSDE1-202ENST00000339438 PARGQ86W56 976 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 MEX3DQ86XN8 651 aaKnown RBP5.1□□□□□ -1.59
CSDE1-202ENST00000339438 OR4K1Q8NGD4 311 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 OR5AP2Q8NGF4 316 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 OR51S1Q8NGJ8 323 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 CYB5D2Q8WUJ1 264 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 SLC38A5Q8WUX1 472 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 ACOT11Q8WXI4 607 aaPredicted RBP5.1□□□□□ -1.59
CSDE1-202ENST00000339438 C14orf79Q96F83 325 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 TMEM27Q9HBJ8 222 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 ASH1LQ9NR48 2969 aaKnown RBP5.1□□□□□ -1.59
CSDE1-202ENST00000339438 DLL3Q9NYJ7 618 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 WWOXQ9NZC7 414 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 CLEC4AQ9UMR7 237 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 CFAP46Q8IYW2 2715 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 TCAPO15273 167 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 LATO43561 262 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 SLC2A10O95528 541 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 IL18BPO95998 194 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 CRHP06850 196 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 FCGR3AP08637 254 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 P2RX1P51575 399 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 PFN3P60673 137 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 LY6G5CQ5SRR4 150 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 CPTPQ5TA50 214 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF546Q86UE3 836 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 EID2Q8N6I1 236 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 SLC30A7Q8NEW0 376 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF426Q9BUY5 554 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 PINK1Q9BXM7 581 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 ZDHHC5Q9C0B5 715 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 BHLHE41Q9C0J9 482 aaPredicted RBP5.1□□□□□ -1.59
CSDE1-202ENST00000339438 MMP26Q9NRE1 261 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 ASF1BQ9NVP2 202 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 CLDND1Q9NY35 253 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 ST6GALNAC2Q9UJ37 374 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 FAM96BQ9Y3D0 163 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 TRBV5-4A0A0C4DH59 114 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 TRAPPC13A5PLN9 417 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 FAM183AA6NL82 134 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 A6NLC8 198 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 OR10H2O60403 315 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 SH3BGRLO75368 114 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 YIF1AO95070 293 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 MELTFP08582 738 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 GKN3PP0CG01 181 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 CD70P32970 193 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 DRD3P35462 400 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 AHRP35869 848 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 TNFRSF4P43489 277 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 CDX1P47902 265 aaPredicted RBP5.1□□□□□ -1.59
CSDE1-202ENST00000339438 RAB4BP61018 213 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 RHOAP61586 193 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 DOC2AQ14183 400 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 ELAVL1Q15717 326 aaKnown RBP5.1□□□□□ -1.59
CSDE1-202ENST00000339438 NKPD1Q17RQ9 610 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 ZDHHC20Q5W0Z9 365 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 FRRS1Q6ZNA5 592 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 CFAP206Q8IYR0 622 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 TMEM99Q8N816 258 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 OR4K5Q8NGD3 323 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 OR5D16Q8NGK9 328 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 OR5W2Q8NH69 310 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 LGALS14Q8TCE9 139 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 DERL3Q96Q80 235 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 TEX101Q9BY14 249 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 MEPEQ9NQ76 525 aaPredicted RBP5.1□□□□□ -1.59
CSDE1-202ENST00000339438 PLA2G2EQ9NZK7 142 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 FOXJ3Q9UPW0 622 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 TMEM184BQ9Y519 407 aaPredicted RBP5.1□□□□□ -1.59
CSDE1-202ENST00000339438 A0A1W2PR77 199 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 H3BMH7 237 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 SOCS6O14544 535 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 CDX4O14627 284 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-202ENST00000339438 KRT33AO76009 404 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 OR2F2O95006 317 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 TGFB1P01137 390 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 IFNA10P01566 189 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 HEXBP07686 556 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 CD14P08571 375 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 RAB5AP20339 215 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 LPOP22079 712 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-202ENST00000339438 OR2F1Q13607 317 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 GAMTQ14353 236 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 BIVMQ86UB2 503 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 LRRTM1Q86UE6 522 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 CLDN19Q8N6F1 224 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 ZSCAN1Q8NBB4 408 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 OR5AK3PQ8NH89 298 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms