RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 CYTIPO60759 359 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 BCL10O95999 233 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 GABRB1P18505 474 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 SLC16A1P53985 500 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 CSNK2BP67870 215 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 TOP3AQ13472 1001 aaPredicted RBP12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 KRR1Q13601 381 aaKnown RBP12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 RNPS1Q15287 305 aaKnown RBP12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 OCLNQ16625 522 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 TMEM201Q5SNT2 666 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 SLC35D2Q76EJ3 337 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 FCRLAQ7L513 359 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 JAZF1Q86VZ6 243 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 TCEANCQ8N8B7 351 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 ZPLD1Q8TCW7 415 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 RNF128Q8TEB7 428 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 RFKQ969G6 155 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 Q96M85 177 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 ADAD1Q96M93 576 aaKnown RBP12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 TSPAN32Q96QS1 320 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 SNX18Q96RF0 628 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 SLX1AQ9BQ83 275 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 CLN6Q9NWW5 311 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 ZNF226Q9NYT6 803 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 A0A1B0GTH9 108 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 TRAF3IP2O43734 574 aaPredicted RBP12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 TLX2O43763 284 aaPredicted RBP12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 AHCYL1O43865 530 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 SERPINI2O75830 405 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 IFNGR1P15260 489 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 HIST1H1CP16403 213 aaKnown RBP12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 CXCR4P61073 352 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 SLC17A1Q14916 467 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 SLC35F1Q5T1Q4 408 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 MED12LQ86YW9 2145 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 CCDC103Q8IW40 242 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 CISD2Q8N5K1 135 aaKnown RBP12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 OR9K2Q8NGE7 335 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 ZNF519Q8TB69 540 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 HDAC2Q92769 488 aaKnown RBP12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 ZNF845Q96IR2 970 aaPredicted RBP12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 LRR1Q96L50 414 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 IL4I1Q96RQ9 567 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 YTHDF1Q9BYJ9 559 aaKnown RBP12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 GP6Q9HCN6 339 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 KLHL9Q9P2J3 617 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 BLOC1S6Q9UL45 172 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 EPG5Q9HCE0 2579 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 CACNA1BQ00975 2339 aa12.97□□□□□ -0.33
NIPAL3-202ENST00000339255 ARHGAP21Q5T5U3 1957 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 IGKV3D-15A0A087WSY6 115 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 IGHV3-15A0A0B4J1V0 119 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 SLC22A20A6NK97 555 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 PRR23D1E9PI22 279 aaPredicted RBP12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 M0R129 80 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 GPR171O14626 319 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 PLGP00747 810 aaPredicted RBP12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 PRR23D2P0DMB1 279 aaPredicted RBP12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 NR2C1P13056 603 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 ACVR2AP27037 513 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 PTGER4P35408 488 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 CHN2P52757 468 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 CDK5R2Q13319 367 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 PON3Q15166 354 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 C6orf141Q5SZD1 244 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 ZNF362Q5T0B9 420 aaPredicted RBP12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 ARMC4Q5T2S8 1044 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 GTF2IRD2BQ6EKJ0 949 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 GTF2IRD2Q86UP8 949 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 GID4Q8IVV7 300 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 KDM8Q8N371 416 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 OR52E2Q8NGJ4 325 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 ASB10Q8WXI3 467 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 RASD2Q96D21 266 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 TUBA1CQ9BQE3 449 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 EMC3Q9P0I2 261 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 TNFRSF10DQ9UBN6 386 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 ZNF346Q9UL40 294 aaKnown RBP12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 DOCK7Q96N67 2140 aa12.96□□□□□ -0.33
NIPAL3-202ENST00000339255 CLCA1A8K7I4 914 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 AHRRA9YTQ3 701 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 CENPBD1B2RD01 187 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 RAMP1O60894 148 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 WBP4O75554 376 aaKnown RBP12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 TNFAIP8O95379 198 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 RENP00797 406 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 CCDC159P0C7I6 412 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 HLA-DOBP13765 273 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 PTGS2P35354 604 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 ACVR1BP36896 505 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 TDGF1P3P51864 188 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 MLLT10P55197 1068 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 ITGADQ13349 1161 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 CRMP1Q14194 572 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 C3AR1Q16581 482 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 ST3GAL2Q16842 350 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 MESTQ5EB52 335 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 RBM48Q5RL73 367 aaKnown RBP12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 NXNL2Q5VZ03 156 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms