RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 TRAV36DV7A0A075B6V5 113 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 B4GALT3O60512 393 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 IFNA4P05014 189 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 POLR2HP52434 150 aaKnown RBP12.69□□□□□ -0.38
RTN4-202ENST00000337526 NXPE3Q969Y0 559 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 CMSS1Q9BQ75 279 aaKnown RBP12.69□□□□□ -0.38
RTN4-202ENST00000337526 PLAC1Q9HBJ0 212 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 DHCR7Q9UBM7 475 aaKnown RBP12.69□□□□□ -0.38
RTN4-202ENST00000337526 MUTYHQ9UIF7 546 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 SULT1B1O43704 296 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 FZD6O60353 706 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 DOK2O60496 412 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 GLCEO94923 617 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 UTS2O95399 124 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 WDPCPO95876 746 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 SNRNP70P08621 437 aaKnown RBP12.69□□□□□ -0.38
RTN4-202ENST00000337526 TRHRP34981 398 aaPredicted RBP12.69□□□□□ -0.38
RTN4-202ENST00000337526 TAS2R46P59540 309 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 ZNF620Q6ZNG0 422 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 Q6ZTK2 550 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 NANOS1Q8WY41 292 aaKnown RBP12.69□□□□□ -0.38
RTN4-202ENST00000337526 ELF4Q99607 663 aaPredicted RBP12.69□□□□□ -0.38
RTN4-202ENST00000337526 PKMYT1Q99640 499 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 SGPP1Q9BX95 441 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 KIR3DX1Q9H7L2 352 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 MBNL1Q9NR56 388 aaKnown RBP12.69□□□□□ -0.38
RTN4-202ENST00000337526 SCN9AQ15858 1988 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 TPRP12270 2363 aaKnown RBP12.68□□□□□ -0.38
RTN4-202ENST00000337526 SULT1C4O75897 302 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 C1QBP02746 253 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 CTHP32929 405 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 LIM2P55344 173 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 CDKN3Q16667 212 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 DUSP6Q16828 381 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 LIPNQ5VXI9 398 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 KCNG3Q8TAE7 436 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 SPPL3Q8TCT6 385 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 IL1F10Q8WWZ1 152 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 DVL3Q92997 716 aaPredicted RBP12.68□□□□□ -0.38
RTN4-202ENST00000337526 SLC46A1Q96NT5 459 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 MAP3K3Q99759 626 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 GSX2Q9BZM3 304 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 C20orf85Q9H1P6 137 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 SLC38A1Q9H2H9 487 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 ARPC4-TTLL3A0A0A6YYG9 625 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 LOC102725191A0A1B0GVB3 256 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 OR7C1O76099 320 aaPredicted RBP12.68□□□□□ -0.38
RTN4-202ENST00000337526 IRS1P35568 1242 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 KIAA1024LP59773 190 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 OPN5Q6U736 354 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 C5orf46Q6UWT4 87 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 ADGRF3Q8IZF5 1079 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 SLC43A2Q8N370 569 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 MIB2Q96AX9 1013 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 RSPRY1Q96DX4 576 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 SLC35A4Q96G79 324 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 HHIPL1Q96JK4 782 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 LUZP4Q9P127 313 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 CD207Q9UJ71 328 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 TMED7-TICAM2A0A0A6YYA0 188 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 CD300LBA8K4G0 201 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 K7EPK0 472 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 SELENOFO60613 162 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 PEX11BO96011 259 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 CPEP16870 476 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 ATP1B3P54709 279 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 FAM71E2Q8N5Q1 922 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 OR5D18Q8NGL1 313 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 SLAMF9Q96A28 289 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 YIPF6Q96EC8 236 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 SLCO5A1Q9H2Y9 848 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 TMED7Q9Y3B3 224 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 ITGB4P16144 1822 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 LRP5O75197 1615 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 A0A0B4J2A0 478 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 TNFSF12O43508 249 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 MED6O75586 246 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 IFNA10P01566 189 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 ZNF44P15621 663 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 MELKQ14680 651 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 ZNF674Q2M3X9 581 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 SLC35D3Q5M8T2 416 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 SLC51BQ86UW2 128 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 PPP1R3BQ86XI6 285 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 LINC00346Q8IVM7 164 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 EID2Q8N6I1 236 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 TMEM99Q8N816 258 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 PLPP7Q8NBV4 271 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 PIGCQ92535 297 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 ZNF775Q96BV0 537 aaPredicted RBP12.68□□□□□ -0.38
RTN4-202ENST00000337526 ZNF578Q96N58 590 aaPredicted RBP12.68□□□□□ -0.38
RTN4-202ENST00000337526 SLC25A21Q9BQT8 299 aaPredicted RBP12.68□□□□□ -0.38
RTN4-202ENST00000337526 SHPKQ9UHJ6 478 aa12.68□□□□□ -0.38
RTN4-202ENST00000337526 C19orf53Q9UNZ5 99 aaPredicted RBP12.68□□□□□ -0.38
RTN4-202ENST00000337526 FOLR3P41439 243 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 ZNF136P52737 540 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 NKG7Q16617 165 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 OPALINQ96PE5 141 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 STACQ99469 402 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms