RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 GLRA1P23415 457 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 ALDH3B1P43353 468 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 CCR8P51685 355 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 IRF8Q02556 426 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 ODF1Q14990 250 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 KIAA0040Q15053 153 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 MRM1Q6IN84 353 aaKnown RBP7.92□□□□□ -1.14
TDP1-201ENST00000335725 LINC01551Q86U37 167 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 VSIG10LQ86VR7 867 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 TMEM183AQ8IXX5 376 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 COMMD1Q8N668 190 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 OR51Q1Q8NH59 317 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 EDAQ92838 391 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 NTNG2Q96CW9 530 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 MRPL13Q9BYD1 178 aaKnown RBP7.92□□□□□ -1.14
TDP1-201ENST00000335725 SLC6A13Q9NSD5 602 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 ABRACLQ9P1F3 81 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 ZNF230Q9UIE0 474 aaPredicted RBP7.92□□□□□ -1.14
TDP1-201ENST00000335725 PHIPQ8WWQ0 1821 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 OR5H14A6NHG9 310 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 DPYSL4O14531 572 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 SRPX2O60687 465 aaPredicted RBP7.92□□□□□ -1.14
TDP1-201ENST00000335725 NTSR2O95665 410 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 CD14P08571 375 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 CASRP41180 1078 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 TRA2BP62995 288 aaKnown RBP7.92□□□□□ -1.14
TDP1-201ENST00000335725 MC1RQ01726 317 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 CLEC20AQ6ZU45 233 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 TTLL10Q6ZVT0 673 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 LRRC56Q8IYG6 542 aaPredicted RBP7.92□□□□□ -1.14
TDP1-201ENST00000335725 LYG1Q8N1E2 194 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 RHEBL1Q8TAI7 183 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 ZNF596Q8TC21 504 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 ABHD3Q8WU67 409 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 DCAF4Q8WV16 495 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 SMARCD2Q92925 531 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 TOMM40LQ969M1 308 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 SLC35E1Q96K37 410 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 CSNK1G1Q9HCP0 422 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 SEMA4BQ9NPR2 832 aaPredicted RBP7.92□□□□□ -1.14
TDP1-201ENST00000335725 NAGKQ9UJ70 344 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 TRAV14DV4A0A0A6YYC5 116 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 A0A1B0GVC2 190 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 ARRDC5A6NEK1 342 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 A6NIN4 97 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 KAT7O95251 611 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 CD8BP10966 210 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 TDGF1P13385 188 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 ZNF7P17097 686 aaPredicted RBP7.92□□□□□ -1.14
TDP1-201ENST00000335725 MAOAP21397 527 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 COMPP49747 757 aaPredicted RBP7.92□□□□□ -1.14
TDP1-201ENST00000335725 RING1Q06587 406 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 RAB40BQ12829 278 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 SLAQ13239 276 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 SFXN4Q6P4A7 337 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 ENPP7Q6UWV6 458 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 GPRIN1Q7Z2K8 1008 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 TTC16Q8NEE8 873 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 OR5AP2Q8NGF4 316 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 OR5L1Q8NGL2 311 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 OR13C2Q8NGS9 318 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 HAVCR2Q8TDQ0 301 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 C15orf40Q8WUR7 153 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 RAB39BQ96DA2 213 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 TMEM56Q96MV1 263 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 ACTRT3Q9BYD9 372 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 CISHQ9NSE2 258 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 TREX1Q9NSU2 369 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 NDOR1Q9UHB4 597 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 HDGFL3Q9Y3E1 203 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 ZNF330Q9Y3S2 320 aaPredicted RBP7.92□□□□□ -1.14
TDP1-201ENST00000335725 NME7Q9Y5B8 376 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 TMEM56-RWDD3S4R434 201 aa7.92□□□□□ -1.14
TDP1-201ENST00000335725 LOXHD1Q8IVV2 1947 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 TRAV39A0A0B4J263 110 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 GABARAPH6UMI1 98 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 HNRNPDLO14979 420 aaKnown RBP7.91□□□□□ -1.14
TDP1-201ENST00000335725 DOK2O60496 412 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 ONECUT2O95948 504 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 UMODP07911 640 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 CCKARP32238 428 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 SHHQ15465 462 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 RBBP7Q16576 425 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 SMIM21Q3B7S5 101 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 SLC10A6Q3KNW5 377 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 MARC1Q5VT66 337 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 NCBP2-AS2Q69YL0 99 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 ETFBKMTQ8IXQ9 262 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 PLPP5Q8NEB5 264 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 SPPL2AQ8TCT8 520 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 SMPDL3AQ92484 453 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 PIK3IP1Q96FE7 263 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 FGF20Q9NP95 211 aaPredicted RBP7.91□□□□□ -1.14
TDP1-201ENST00000335725 PRAMEF27A3QJZ7 478 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 ANKRD61A6NGH8 418 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 PRAMEF25A6NGN4 478 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 F8VVB4 439 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 F8VWA3 439 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 AQP7O14520 342 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 YY2O15391 372 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms