RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 SYT9Q86SS6 491 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 TMEM123Q8N131 208 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 OR51A4Q8NGJ6 313 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 TMED6Q8WW62 240 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 HSD17B8Q92506 261 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 MACROD1Q9BQ69 325 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 ZMAT3Q9HA38 289 aaKnown RBP9.11□□□□□ -0.95
COL4A6-201ENST00000334504 MED17Q9NVC6 651 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 NPFFR2Q9Y5X5 522 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 SLC22A7Q9Y694 548 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 SLIT2O94813 1529 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 UNCXA6NJT0 531 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 SYT5O00445 386 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 LDB3O75112 727 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 RPL13AP40429 203 aaKnown RBP9.11□□□□□ -0.95
COL4A6-201ENST00000334504 CATR1Q13166 79 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 EXOSC7Q15024 291 aaKnown RBP9.11□□□□□ -0.95
COL4A6-201ENST00000334504 C1orf220Q5T0J3 134 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 MARCH8Q5T0T0 291 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 SLC35D2Q76EJ3 337 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 AMIGO3Q86WK7 504 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 RAB7BQ96AH8 199 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 HRASLSQ9HDD0 168 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 OPN1LWP04000 364 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 RPA2P15927 270 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 PTBP1P26599 531 aaKnown RBP eCLIP9.11□□□□□ -0.954e-6■■■■□ 21.1
COL4A6-201ENST00000334504 OR10A3P58181 314 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 KRTDAPP60985 99 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 RING1Q06587 406 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 FXNQ16595 210 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 PHLDA2Q53GA4 152 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 RANBP10Q6VN20 620 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 APH1BQ8WW43 257 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 SLC25A46Q96AG3 418 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 GPR174Q9BXC1 333 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 SPHK2Q9NRA0 654 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 SLC35A3Q9Y2D2 325 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 C17orf105B2RV13 164 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 MAKP20794 623 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 GCH1P30793 250 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 H3F3AP84243 136 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 Q6ZRG5 221 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 COMMD1Q8N668 190 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 EGLN2Q96KS0 407 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 ZIC5Q96T25 663 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 LMF2Q9BU23 707 aaKnown RBP9.1□□□□□ -0.95
COL4A6-201ENST00000334504 TAS2R5Q9NYW4 299 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 LOC100289279A0A1B0GTE1 492 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 LOC102725191A0A1B0GVB3 256 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 B4GALT3O60512 393 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 GPR85P60893 370 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 RANP62826 216 aaKnown RBP9.1□□□□□ -0.95
COL4A6-201ENST00000334504 EEF1A2Q05639 463 aaKnown RBP9.1□□□□□ -0.95
COL4A6-201ENST00000334504 LCTLQ6UWM7 567 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 RHOUQ7L0Q8 258 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 GLCCI1Q86VQ1 547 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 NIPSNAP1Q9BPW8 284 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 OR51I2Q9H344 312 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 C8orf33Q9H7E9 229 aaPredicted RBP9.1□□□□□ -0.95
COL4A6-201ENST00000334504 TRAPPC2LQ9UL33 140 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 MICAL3Q7RTP6 2002 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 SGK494L7N484 410 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 SOCS7O14512 581 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 MMP2P08253 660 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 OR2T7P0C7T2 308 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 USF1P22415 310 aaPredicted RBP9.1□□□□□ -0.95
COL4A6-201ENST00000334504 GATMP50440 423 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 HSF1Q00613 529 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 PDE7AQ13946 482 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 ZNF542PQ5EBM4 170 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 CD300LGQ6UXG3 332 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 ZNF620Q6ZNG0 422 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 LRRC18Q8N456 261 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 ZNF680Q8NEM1 530 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 OR13D1Q8NGV5 346 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 OR2T27Q8NH04 317 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 SPNS1Q9H2V7 528 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 HIPK2Q9H2X6 1198 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 A3GALT2U3KPV4 340 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 G3V3Q6 166 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 OR7C1O76099 320 aaPredicted RBP9.1□□□□□ -0.95
COL4A6-201ENST00000334504 PFKMP08237 780 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 HNRNPA2B1P22626 353 aaKnown RBP9.1□□□□□ -0.95
COL4A6-201ENST00000334504 F2RL1P55085 397 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 NXNL2Q5VZ03 156 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 LPCAT3Q6P1A2 487 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 ZNF765Q7L2R6 523 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 MDGA1Q8NFP4 955 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 OR5D18Q8NGL1 313 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 TANKQ92844 425 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 TMEM106AQ96A25 262 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 ISL2Q96A47 359 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 SRRQ9GZT4 340 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 NXT1Q9UKK6 140 aaKnown RBP9.1□□□□□ -0.95
COL4A6-201ENST00000334504 MYO5BQ9ULV0 1848 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 A0A1W2PQU0 124 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 SULT2B1O00204 365 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 ACOT8O14734 319 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 MTCP1P56278 107 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 HBA1P69905 142 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms