RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 UTP23Q9BRU9 249 aaKnown RBP16.63■□□□□ 0.25
PKP3-201ENST00000331563 METTL1Q9UBP6 276 aaKnown RBP16.63■□□□□ 0.25
PKP3-201ENST00000331563 ZNF629Q9UEG4 869 aaPredicted RBP16.63■□□□□ 0.25
PKP3-201ENST00000331563 TAC3Q9UHF0 121 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 ZNF230Q9UIE0 474 aaPredicted RBP16.63■□□□□ 0.25
PKP3-201ENST00000331563 TMEM272A0A1B0GTI8 110 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 C1orf196B1AJZ1 125 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 DPP4P27487 766 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 HTR2AP28223 471 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 AGTR1P30556 359 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 SIRPAP78324 504 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 MRPS10P82664 201 aaKnown RBP16.63■□□□□ 0.25
PKP3-201ENST00000331563 TAF13Q15543 124 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 TMEM71Q6P5X7 295 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 C17orf64Q86WR6 236 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 MISPQ8IVT2 679 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 OR8S1Q8NH09 359 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 OR51A7Q8NH64 312 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 PFN4Q8NHR9 129 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 GLYATL1Q969I3 302 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 MRPL38Q96DV4 380 aaKnown RBP16.63■□□□□ 0.25
PKP3-201ENST00000331563 ZMYND19Q96E35 227 aaPredicted RBP16.63■□□□□ 0.25
PKP3-201ENST00000331563 PELI1Q96FA3 418 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 CMTM3Q96MX0 182 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 VRK1Q99986 396 aaPredicted RBP16.63■□□□□ 0.25
PKP3-201ENST00000331563 MS4A8Q9BY19 250 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 TREM1Q9NP99 234 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 WSB2Q9NYS7 404 aaPredicted RBP16.63■□□□□ 0.25
PKP3-201ENST00000331563 MEIS3P1A6NDR6 274 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 TBC1D3BA6NDS4 549 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 PPM1DO15297 605 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 TBX6O95947 436 aaPredicted RBP16.62■□□□□ 0.25
PKP3-201ENST00000331563 SSR2P43308 183 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 NPBWR1P48145 328 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 ACTC1P68032 377 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 ACTA1P68133 377 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 RHOUQ7L0Q8 258 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 TRAM1L1Q8N609 369 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 OR51S1Q8NGJ8 323 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 FBXO17Q96EF6 278 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 OR7D2Q96RA2 312 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 RNF122Q9H9V4 155 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 BHLHE40O14503 412 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 SLC31A2O15432 143 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 FCMRO60667 390 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 IL9P15248 144 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 CSF2RBP32927 897 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 CLDN2P57739 230 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 SPCS3P61009 180 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 GAB4Q2WGN9 574 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 TMED4Q7Z7H5 227 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 GLB1L2Q8IW92 636 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 NRTNQ99748 197 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 AIF1LQ9BQI0 150 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 CHST6Q9GZX3 395 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 CMC2Q9NRP2 79 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 DEC1Q9P2X7 70 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 ASF1AQ9Y294 204 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 V9GY05 133 aa16.62■□□□□ 0.25
PKP3-201ENST00000331563 EIF4E2O60573 245 aaKnown RBP16.61■□□□□ 0.25
PKP3-201ENST00000331563 TBX19O60806 448 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 ADH1CP00326 375 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 GTF2F2P13984 249 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 MAKP20794 623 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 TAS2R60P59551 318 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 CHAF1BQ13112 559 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 ANKRD39Q53RE8 183 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 PWWP2BQ6NUJ5 590 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 THSD4Q6ZMP0 1018 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 OR13C2Q8NGS9 318 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 RPP25Q9BUL9 199 aaKnown RBP16.61■□□□□ 0.25
PKP3-201ENST00000331563 MTIF3Q9H2K0 278 aaKnown RBP16.61■□□□□ 0.25
PKP3-201ENST00000331563 C20orf141Q9NUB4 165 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 COMMD9Q9P000 198 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 CARHSP1Q9Y2V2 147 aaKnown RBP16.61■□□□□ 0.25
PKP3-201ENST00000331563 F5H0A9 414 aaPredicted RBP16.61■□□□□ 0.25
PKP3-201ENST00000331563 H7BY64 318 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 ZNF44P15621 663 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 ITPKBP27987 946 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 MECP2P51608 486 aaKnown RBP16.61■□□□□ 0.25
PKP3-201ENST00000331563 PPP2CBP62714 309 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 PPP2CAP67775 309 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 STPG1Q5TH74 334 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 C3orf33Q6P1S2 294 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 PRAP1Q96NZ9 151 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 PLA2G2FQ9BZM2 168 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 TLNRD1Q9H1K6 362 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 TMEM231Q9H6L2 316 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 TCF7L1Q9HCS4 588 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 OR5V1Q9UGF6 321 aa16.61■□□□□ 0.25
PKP3-201ENST00000331563 TRAV27A0A087WT01 109 aa16.6■□□□□ 0.25
PKP3-201ENST00000331563 TRAV14DV4A0A0A6YYC5 116 aa16.6■□□□□ 0.25
PKP3-201ENST00000331563 NDUFS4O43181 175 aa16.6■□□□□ 0.25
PKP3-201ENST00000331563 OR1F1O43749 312 aa16.6■□□□□ 0.25
PKP3-201ENST00000331563 FADS1O60427 444 aa16.6■□□□□ 0.25
PKP3-201ENST00000331563 RAB40ALP0C0E4 278 aa16.6■□□□□ 0.25
PKP3-201ENST00000331563 TMIGD3P0DMS9 266 aaPredicted RBP16.6■□□□□ 0.25
PKP3-201ENST00000331563 NDUFB7P17568 137 aa16.6■□□□□ 0.25
PKP3-201ENST00000331563 HOXA6P31267 233 aa16.6■□□□□ 0.25
PKP3-201ENST00000331563 FXYD6P3P58550 94 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms