RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 MRM2Q9UI43 246 aaKnown RBP13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 ZNF281Q9Y2X9 895 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 CENPXA8MT69 81 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 GPRIN2O60269 458 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 BGLAPP02818 100 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 CD1AP06126 327 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 SHBQ15464 509 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 PYHIN1Q6K0P9 492 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 UNQ9370/PRO34162Q6UXP9 181 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 PM20D2Q8IYS1 436 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 YIPF7Q8N8F6 280 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 C7orf57Q8NEG2 295 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 ZNF671Q8TAW3 534 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 LGALS14Q8TCE9 139 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 HLA-CQ95604 372 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 ZFP3Q96NJ6 502 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 GFI1Q99684 422 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 MARVELD1Q9BSK0 173 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 ZCCHC4Q9H5U6 513 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 TAS2R5Q9NYW4 299 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 ING1Q9UK53 422 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 MOKQ9UQ07 419 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 BOLA1Q9Y3E2 137 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 PI4KAP42356 2102 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 A0A1B0GTH9 108 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 ZNF879B4DU55 563 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 K7ESF4 209 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 ARHGEF9O43307 516 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 AKR7A3O95154 331 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 CD3GP09693 182 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 AHCYP23526 432 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 HLA-DMAP28067 261 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 MRPS15P82914 257 aaKnown RBP13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 HES5Q5TA89 166 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 LIPNQ5VXI9 398 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 COX15Q7KZN9 410 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 OVCH1Q7RTY7 1134 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 DPY19L4Q7Z388 723 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 IZUMO1Q8IYV9 350 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 ZNF433Q8N7K0 673 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 ZNF441Q8N8Z8 693 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 OR6N2Q8NGY6 317 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 RPS4Y2Q8TD47 263 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 FOXN4Q96NZ1 517 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 OR2B2Q9GZK3 357 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 C12orf10Q9HB07 376 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 ANKRD10Q9NXR5 420 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 ABRACLQ9P1F3 81 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 TEKT2Q9UIF3 430 aa13.47□□□□□ -0.25
CLCNKA-201ENST00000331433 ADAMTS20P59510 1910 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 TRAV36DV7A0A075B6V5 113 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 A0A1W2PQD3 144 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 UPK3AO75631 287 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 SLC25A12O75746 678 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 ADRB1P08588 477 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 GP1BBP13224 206 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 PRKCAP17252 672 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 PGCP20142 388 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 SLC6A1P30531 599 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 EVI2BP34910 448 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 DGCR2P98153 550 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 WDR45BQ5MNZ6 344 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 OR5M10Q6IEU7 315 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 TMEM53Q6P2H8 277 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 MTFR2Q6P444 385 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 WDR74Q6RFH5 385 aaPredicted RBP13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 FAM220AQ7Z4H9 259 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 CDC20BQ86Y33 519 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 SLC38A9Q8NBW4 561 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 OR2T4Q8NH00 348 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 PTDSS2Q9BVG9 487 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 SLC7A5P2Q9GIP4 190 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 ZNF768Q9H5H4 540 aaKnown RBP13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 IKZF2Q9UKS7 526 aa13.46□□□□□ -0.25
CLCNKA-201ENST00000331433 INMT-MINDY4F8WBC2 141 aa13.46□□□□□ -0.26
CLCNKA-201ENST00000331433 CDC40O60508 579 aaKnown RBP eCLIP13.46□□□□□ -0.26
CLCNKA-201ENST00000331433 EIF4E2O60573 245 aaKnown RBP13.46□□□□□ -0.26
CLCNKA-201ENST00000331433 ARSBP15848 533 aa13.46□□□□□ -0.26
CLCNKA-201ENST00000331433 LCN1P31025 176 aa13.46□□□□□ -0.26
CLCNKA-201ENST00000331433 BTCP35070 178 aa13.46□□□□□ -0.26
CLCNKA-201ENST00000331433 CXCL12P48061 93 aa13.46□□□□□ -0.26
CLCNKA-201ENST00000331433 PNLIPRP2P54317 469 aa13.46□□□□□ -0.26
CLCNKA-201ENST00000331433 EMC4Q5J8M3 183 aa13.46□□□□□ -0.26
CLCNKA-201ENST00000331433 SLC7A5P1Q8MH63 180 aa13.46□□□□□ -0.26
CLCNKA-201ENST00000331433 STT3BQ8TCJ2 826 aa13.46□□□□□ -0.26
CLCNKA-201ENST00000331433 THAP3Q8WTV1 239 aaPredicted RBP13.46□□□□□ -0.26
CLCNKA-201ENST00000331433 MAP6Q96JE9 813 aa13.46□□□□□ -0.26
CLCNKA-201ENST00000331433 SNX18Q96RF0 628 aa13.46□□□□□ -0.26
CLCNKA-201ENST00000331433 TMEM165Q9HC07 324 aa13.46□□□□□ -0.26
CLCNKA-201ENST00000331433 LAMP5Q9UJQ1 280 aa13.46□□□□□ -0.26
CLCNKA-201ENST00000331433 ANKRD61A6NGH8 418 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 H3BSH0 61 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 ORC5O43913 435 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 SUSD5O60279 629 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 FADS1O60427 444 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 SLC43A1O75387 559 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 ABHD16AO95870 558 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 RENP00797 406 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 HOXD12P35452 270 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms